Trametes versicolor: TRAVEDRAFT_26123
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Entry
TRAVEDRAFT_26123 CDS
T04795
Name
(RefSeq) Shwachman-Bodian-diamond syndrome protein
KO
K14574
ribosome maturation protein SDO1
Organism
tvs
Trametes versicolor
Pathway
tvs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TRAVEDRAFT_26123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tvs03009
]
TRAVEDRAFT_26123
Ribosome biogenesis [BR:
tvs03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
TRAVEDRAFT_26123
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
Phage_TAC_5
Motif
Other DBs
NCBI-GeneID:
19412620
NCBI-ProteinID:
XP_008031916
JGI:
26123
LinkDB
All DBs
Position
Unknown
AA seq
248 aa
AA seq
DB search
MPINQPSNQIKLTNVSIVRLKKGGKRFEIACYKNKVQEWRSGVETDIDDVLQIANVFMNV
SKGEVAKSQELKKSFNTTDVNTIVKEILQKGELQVGDKEREHDLSSVRREIATLVAEKCV
DPATQRPYPVGVIDKAMTEAGFSVRPGKNAKAQVSECIKLLQTNSKLPIQRARMRVRVSL
PVADVEKVKPKVLEGADSVEKDEQGADEWEAILLIDPSQFRILNDLLQKECKGRGRLETL
TFAATAGS
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcaaccagccgtcgaatcagatcaagctcacgaacgtttccatcgttcgcctc
aagaaaggcggcaagcgcttcgagatcgcctgctacaagaacaaagtccaggaatggcgc
agcggtgtagagaccgacatcgacgatgtcctccagatcgccaacgtcttcatgaacgtc
tcgaaaggagaagtcgcgaagagtcaggaactgaagaagtccttcaacacgactgacgtc
aacaccatcgtgaaggagattcttcagaagggagagctgcaagtcggggacaaggagcgc
gaacacgatctctcatccgtccgacgtgagattgctactcttgttgcggagaagtgcgtc
gatcccgcgacgcagcggccttaccccgtcggcgtgatcgataaagccatgacggaagcc
gggttcagtgtgcgccctgggaagaatgcgaaagcgcaggtatcggaatgcatcaagctg
ctccagaccaactcgaagctacccattcagcgcgccaggatgcgtgttcgtgtctccctc
cctgtcgccgatgtagagaaggtgaaaccgaaagttttggagggcgctgactcggtggag
aaagatgagcagggcgcagacgaatgggaggcgatcctcctcattgatcccagtcaattc
cgcatcctcaacgatctgctgcaaaaggaatgcaagggacgcggacgcctcgaaaccttg
acgtttgccgcgactgctggaagttag
DBGET
integrated database retrieval system
