Trametes versicolor: TRAVEDRAFT_27006
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Entry
TRAVEDRAFT_27006 CDS
T04795
Name
(RefSeq) uncharacterized protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tvs
Trametes versicolor
Pathway
tvs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TRAVEDRAFT_27006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvs03019
]
TRAVEDRAFT_27006
03036 Chromosome and associated proteins [BR:
tvs03036
]
TRAVEDRAFT_27006
Messenger RNA biogenesis [BR:
tvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TRAVEDRAFT_27006
Chromosome and associated proteins [BR:
tvs03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
TRAVEDRAFT_27006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nucleoporin_FG
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
19412774
NCBI-ProteinID:
XP_008034785
JGI:
27006
LinkDB
All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MFGSSWANPQQNQQNQQGQQQPSAFGQPSGFGGTGAFGSGGAFGQPQPPQQQQPQANPMF
GNLGGGTNTGSTGTGFGAFGSTNTSNAGGGLFGQPKPTTGFGAFGGGGTTAFGSTTATPT
PAFGGGGAFGSSTPATGSSTGANLFGSQPSTSTSAFGGGGGLFGANKPATGFGTTQTSTD
GGAPVTTGTANPPFSPYTEKDNINPSITLQYQSITAMPQYRSSTFEELRLQDYQQGRKTA
GAFGQTTFGAPAQPAQPTGGLFGQPAAPAATGTTFGGFGNTSTTAQPATTGFGAFGQPAN
TTNTTGGSLFGGGGAFGQPSQPQQPQQQQPQQPAGFGAFGQPQNQQNNTGGGLFGGGGAF
GANNQAKPAFGASTTGFGGGGAFGQPQTNPQQPAAGGLFGQPQQNTATTGFGNFGTANSN
AQKPSLFGATNTTQPATTGFGGFGTQNQAQPQQGSQPAGGLFGGGGGLFGQPQQQNQQQP
AAGGLFGTTQPAQQQQQQPGGGLFGGGGGLFGTQQQPAQQGAQAQPQQNSFGGLFGAPKP
TINTTQPTGGLFGGGFGSTLGQQPQNQQPATGLFGSTLGQQPQNQQNTNSFGSGGLFGKP
AAPNLGASMSTGQQQGGLGTSLFGNSTLGGSTATMGASTLGQSQAPLMASIAQPIAAPLP
IFSMLPPGPRAVTLDQQPKKKPGYFVDVPTRSPVPQLQLRYAPAGTKLRGFGSTSTPPGA
SSSTLGGSLLYSSGKPNALSLSKASTTKSLLGPDAFLTNGAPSPTLGSGGRQSVKKLTLD
KKVEAADLFSKSNNGPSFSPALGLAAREKEAAAANGSYFRQESPSPAARKESPKKSNRIV
AQSTSEILGQPSRPGGPGTAPAKGPQDPEELQEGDYWVKPDLETLKKMGHDELMSFSGLT
VGRVGYGQITFLEPVDLTGLPRLSSLLGEVIRFDDKECSVYPEADDAEKPPPGSGLNVKA
RLDLVRCWALDKASREPIKDPEHPAAQRHLKRLKTMKETQFEGFDLEEGRWTFTVDHL
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctcgtcgtgggcgaacccccagcagaaccaacagaaccagcaaggccaacag
cagccaagcgcgtttgggcagccatctggctttggcggtaccggcgcgttcggctctgga
ggcgcgttcggtcaaccgcaaccaccacaacagcagcagccacaggctaatccgatgttt
ggaaatctcggtgggggaacgaacacaggctcgacgggcacgggtttcggcgcttttggg
tccacgaacacgtcgaacgcgggcgggggtctgtttggtcaaccgaagccgaccacaggg
ttcggcgcgtttggaggagggggcacgacagcgtttggaagcaccacggcgactccaacg
ccagccttcggtggcggaggggcattcgggagcagtactcctgcaacaggatccagcacg
ggggcaaacctctttggctctcaaccctctacgagcacgagcgcgtttggaggtggcggg
ggtttgtttggggccaacaagcccgcgactggatttggtaccacccagacatccaccgat
ggtggagcgcctgttacaactggaaccgcgaacccgccgttcagtccctacactgagaag
gacaacatcaatccctccatcacgctgcagtaccagagtatcacagccatgccgcagtac
cgttcatcgactttcgaggagctccgactgcaagactaccagcagggccgcaaaacagcg
ggtgcctttggacagacgaccttcggcgctcctgcgcaacccgctcaaccaacgggtggc
ttgtttggacagcctgctgcccctgctgctaccggaacgacgtttggaggctttggtaac
actagcacgactgctcagcctgctacgaccggctttggcgccttcggtcaacctgcaaat
acgaccaatactacaggaggcagccttttcggcggcgggggagcctttggtcaaccgagc
caaccacaacagccacagcagcagcaaccgcaacagcctgcgggttttggcgcatttgga
cagccgcagaaccaacagaacaacaccggaggcggattgtttggcggaggaggagcattt
ggcgccaataaccaggcgaagccagctttcggtgctagcacgactggattcggtggtggt
ggtgcgttcggccaaccgcaaacgaacccacagcaacctgcagccggtggtctcttcggt
caaccccaacagaacacggctactactggttttggtaattttggtacagcaaacagcaat
gcccaaaagccttcattgtttggcgctacgaacacaacacaacctgccacaacgggcttc
ggtggcttcggcactcagaaccaggcgcagccgcagcaaggttcacaaccagcgggcggt
ctcttcggtggcggtgggggcctattcggccagccgcagcaacagaaccagcagcaacct
gcagctggaggactattcggcaccacacagcccgcacaacagcaacagcagcaaccaggg
ggagggctatttggcggagggggtggtctgtttggcactcagcagcagcccgcccagcaa
ggtgcacaggcacagcctcagcagaattctttcggtggcctctttggtgcgccgaagccc
accatcaacacgacgcaacctacaggcggactatttggtggaggcttcggttcgacgctc
ggtcagcaacctcagaaccaacagccagcaaccggtttgtttggatctacacttggccag
caacctcagaaccaacagaacacgaactcatttggttctggtggtctctttggaaagccg
gccgcgccgaacctcggcgcgtcgatgtctacaggtcagcagcagggcggccttggcacg
tcgctctttgggaacagcacccttggtggctcgaccgctaccatgggtgcctccactcta
gggcagtcgcaggctcctctgatggcctctatcgcgcaacccatcgctgcgcccttacct
atcttcagcatgctgccgccaggcccacgtgctgtgaccttggatcaacagccgaagaag
aagccaggttactttgtcgacgtccccacgcgatctccggtaccgcagctgcaactccga
tacgccccggctggcaccaagctgcgcgggttcggctcaacgtccactccaccgggtgca
agctccagtacccttggcggcagtctactctactcttctggaaagcccaatgcgttgtct
ctgagtaaggcatcgacgacgaagagcttgcttggtcccgacgcattcttgaccaacggc
gcccccagccctactctgggcagtggtgggcggcagagcgtcaagaagctcacgttggat
aagaaggtcgaggcagcagacttgttcagcaagtctaacaacgggccgtcattcagcccc
gcgttgggccttgctgctcgggagaaggaagcggcggctgcgaacggttcatacttccgt
caagagtccccttcccccgccgcgcgcaaggagtcaccaaagaagtcgaaccgcatcgtc
gcgcagagcaccagcgagattctcggccagccttcgcgaccgggtggaccaggaactgct
ccagcgaagggtccccaagaccccgaagagctgcaggagggcgactactgggtgaagcct
gacctggagacgctgaagaagatgggacacgacgagttgatgtcgttcagcgggctcacc
gtgggccgcgtcggatacgggcagatcacgttccttgagcccgtcgacctgacggggctc
ccgcggctgtcgagcctgctgggcgaagtcatccggttcgacgacaaggagtgcagcgtg
taccctgaggcggacgacgcagagaagccgccgccggggtcgggcctgaacgtaaaggcg
cggctcgacctcgtgcgatgctgggcgttggacaaggcgtcgcgggagcctatcaaggat
ccagagcaccccgccgcgcagaggcatctgaagcggctgaagacgatgaaggagacgcag
ttcgagggcttcgatctcgaagagggccgatggacgttcaccgtcgaccacctctga
DBGET
integrated database retrieval system
