Trametes versicolor: TRAVEDRAFT_27293
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Entry
TRAVEDRAFT_27293 CDS
T04795
Name
(RefSeq) uncharacterized protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tvs
Trametes versicolor
Pathway
tvs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRAVEDRAFT_27293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvs03019
]
TRAVEDRAFT_27293
Messenger RNA biogenesis [BR:
tvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TRAVEDRAFT_27293
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TRAVEDRAFT_27293
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
19412821
NCBI-ProteinID:
XP_008034832
JGI:
27293
LinkDB
All DBs
Position
Unknown
AA seq
742 aa
AA seq
DB search
MAARKLQTEIDRTLKKVSEGVEVFESIYDKMQASTNQTQKEKLETDLKTQIKKLQRLRDQ
IKTWVASNDIKDKSSLLDNRKLIETQMEKFKACEKEMKTKAFSKEGLTQASKLDPKQQEK
VDTMAWVQTMMDDLMVQVESAEAEIETLQGGGKKKNKSGGAQAERLESLERLNERRKWHI
SRLEIILRLLDNGSLATDRIIALQDDVKYFVDSNMEEEFEEYEEVYDDLNLDEEEEKFRL
PADDSESEVSEEPSEDLPIRTPAKKHDEESVASSHKRDSSPVLKKAAVTLTQRKQSIATE
TAKPPPPANFAQQSVASMVKAPVPPRNPQTGYAKVAAAAVAPLALSTTPSTSVTSNVTAV
PSTPSVTTASSSAALDQQSAVTSSPSLTHPSITSPMLSSASLSHRPDDSLHSAYGSPALL
NTVPSAIGGPAATSSPQRQTARKASLPSPTSLQPPGIPHHALPDSQATAVSPLNGSSSPS
TQVIGQQPPAPAGLSPLPQEGRTYPAASPSVNPLAVSPMPAPAQQVPQFPPGVALGPADQ
TKLAQAAPGSARPPSAAASQLPPGAQLPQQQQRQNAFPGSLSDLVMSFESVKQKAPHRMS
NLDQVHKLLQGSYSSMPQPQDTEKPKYYVPRNPIQTPAYYPQVPNPILSSPGIFSQLDVE
TLFYVFYYHPGTYQQYLAAKELKRQSWRFHVKYLTWFQRHSEPQAITEEYEQGVYVYFDW
EGSWCQRKKSDFRFEYRYLSED
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacggaagctgcaaaccgagatagaccgcaccttgaagaaggtctcggagggc
gtcgaggtcttcgagagcatatacgacaagatgcaggcctccacaaaccagacacaaaag
gagaagctggagacggatctgaagacacaaatcaagaagctgcagcgactacgagaccaa
atcaagacgtgggtcgcgagcaatgacatcaaggacaagagttcattgctcgacaaccgc
aagctgattgagacgcaaatggagaagttcaaagcatgcgagaaggagatgaagacgaag
gctttctcgaaagagggccttacacaagcgtccaagctcgacccgaagcagcaagagaaa
gtggacaccatggcatgggtccagacgatgatggacgacctgatggtccaagtcgagtct
gcggaggcggaaattgagacattgcaagggggcggtaagaagaagaacaaatctgggggc
gcacaagcagaacggctagagtctctggagaggttgaacgagaggagaaagtggcatata
agccgcctcgagatcatcctccggttactcgacaatggttctctcgccacggacaggatc
atcgcattgcaagacgacgtcaagtacttcgtggacagcaatatggaggaggagttcgag
gagtatgaggaagtatatgacgacctcaacctggacgaagaggaggagaagttcaggtta
ccggcagatgatagcgagagcgaggtgtccgaggagccaagtgaagacttgccaatacgc
acgcctgcgaagaaacacgatgaggagagtgttgcaagcagtcacaaacgagatagcagt
ccagtattgaagaaggcagcggtaacattaacacaacgaaaacaatcaatagcaacagaa
accgcgaaacctccaccacccgccaacttcgcccaacagtcagtagcaagtatggtgaag
gcgcctgtaccaccacgaaatcctcaaacgggatatgcgaaagtcgcagctgcggcagtg
gcaccacttgcactatcaacaacaccatcgacatcagtaacgtcgaatgtgactgctgta
ccatcaacaccttcggtgacgacggcgtcgagctcggcagcgttggaccagcagtctgca
gtgacctcttcgccaagcctgacacatccttcaataacaagcccaatgctctcctctgcg
tcactatcacatcgaccagacgactccttgcattctgcctacggctctcctgcgcttctt
aacacggtacccagtgcgatcggtggccctgctgcgacatcgtccccacaacggcaaaca
gctcgcaaagcgtctctaccctcaccaacatcgttgcaaccacccggcatccctcaccac
gcactaccggactcgcaagcgacagcggtctcgccactcaacggcagctcgtcaccgtca
acgcaagtcatcggccagcaaccaccagcacccgccgggctctcgccactcccgcaagag
gggcgtacgtaccccgctgcgtcgccctcggtcaacccgctcgccgtgtccccaatgccc
gcgcccgcgcagcaagtgccccaattcccgcccggggtcgcgctcgggcctgcggaccag
acgaagctcgcacaggcagcgccgggttctgcgcgtccgccctctgccgccgcgtcgcag
ctgccgcctggtgcgcagctgccccagcagcaacagcgccagaacgcgttccccggctcg
ctttctgacttggtgatgtcgtttgagagtgtgaagcaaaaggcgccacaccggatgtca
aacctcgaccaggtgcacaagctgctgcagggcagctactcgagcatgccgcaaccacag
gacacggagaagccgaagtactacgtaccgcggaaccccatccagacgcctgcgtactac
ccgcaggtaccgaaccccatcctgagctcgccaggcatcttctcgcaactcgacgtcgag
acgctcttctacgtgttctactaccacccgggcacgtaccagcaatacctcgcggcgaag
gagctcaaacgccagtcatggcggttccacgtgaagtacctgacgtggttccagcgtcac
tccgagccgcaggcgatcacggaggagtacgagcagggcgtgtacgtctacttcgactgg
gagggctcgtggtgccagcggaagaagagcgacttccgcttcgagtaccgttacctctcc
gaggactga
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integrated database retrieval system
