Trametes versicolor: TRAVEDRAFT_27372
Help
Entry
TRAVEDRAFT_27372 CDS
T04795
Name
(RefSeq) transcription factor IIF subunit TFG1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
tvs
Trametes versicolor
Pathway
tvs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TRAVEDRAFT_27372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvs03021
]
TRAVEDRAFT_27372
Transcription machinery [BR:
tvs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
TRAVEDRAFT_27372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
19412839
NCBI-ProteinID:
XP_008034850
JGI:
27372
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MAKGTASLFHPKPSRPTLPKKDSPSTNTPSPGPSQSTPGTPKKAATPATRPPQQRPPRPL
GIPPMQKPKPKADDDEKKQALPDGPYAEFRLMSSKLNGWKYDVMKFESRKRVDINTWAAP
VKLNRKEPRREDAPDAASLQAVSAMVGSDGKLVIGADGKVVMVDAAGRPVRAPVDADEAG
EEKGKGKDKKKRFVKKTRQVFLVPEETRQLRREERHPWVMEDAKHDETWVGKMEEVSKSQ
TYAMFMPAADDVFKFVPAHRWYKFQKKPHYHIPNLEEAETLMTKMQKHKDTHWTLRQRTE
QATGGSSLVHSAGTSLGPGGRKLRTVDSGPSELFGGDDDEDGGDSKRRAKRENGAEGDLD
ELDFEDTFADDEEKMDLDDKEDDETKELEERLKKEYKNANKLREGHIDESDEEEEETQLT
GAGKNLQKTLKKLDKDGAYDDSDDEKNPYASEEEEEEEEIPIAPTGPAIQPVEPKPGARS
ASQTSPVLQAGKPTANGQPPSTPKTEPLPQSISRPTSPAPAPGHGGHSVVARRATSPKMP
KLKTAIPSRAGSPLASPNGASPPASRATSPTAGSPPPAPSASGGAKALKRKATDDGSAGA
AGGAPGSVPRLKKRKAQLPPGAELEDRMVIEWLRATPSASTRECILHFTPYLTNEEKKNK
FTALVKEVAQLSKGVLVLRPAYRGAATAPSPAA
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaggcacagcgagcctcttccacccgaagcccagccggcccacactcccaaag
aaggactcgccgagcacgaacacgccctcacctgggccctcacaatccacccccggcacg
ccgaagaaggccgccactcccgccactcgcccaccgcagcagcggcccccccgcccccta
gggatacccccaatgcaaaagcccaagcccaaggccgacgatgacgagaagaaacaagcc
ctgcccgatggcccatacgcggagttccggctgatgtcgtcgaagctgaacgggtggaag
tacgacgtgatgaagttcgagtcgcgcaagcgggtcgacatcaacacctgggcggcccca
gtgaagctgaaccgcaaggagccgcggcgcgaggacgccccagacgcggcatcgctgcag
gcggtgagcgcgatggtcggctcggacgggaagctcgtcatcggcgcggacgggaaggtg
gtgatggtcgacgcggcggggcggccggtgcgcgcgcccgtggatgcggacgaagctggg
gaggagaagggcaagggcaaggacaagaagaagcggttcgtgaagaagacgcggcaggtg
ttcctcgtgcccgaggagacgcggcagctgcggcgcgaggagcgccacccgtgggtgatg
gaggatgcgaagcacgacgagacgtgggtgggcaagatggaagaggtgtcgaagtcgcag
acgtatgcgatgttcatgcccgccgcggacgatgtcttcaagttcgtgcccgcacaccgg
tggtacaagtttcagaagaagccgcattatcatattcccaacctcgaggaggcggaaact
ttgatgaccaaaatgcagaagcacaaggatacccattggacgctccgacaaagaaccgag
caagccacgggtggctcatctctcgtgcacagcgcaggcacaagtctggggcccggcggt
cggaagctgaggacggtcgacagtggcccatccgagctcttcggcggtgacgatgatgaa
gacggcggcgacagcaagcggagagccaaacgcgagaacggggccgagggtgacctcgat
gagctagacttcgaagacacatttgcagatgacgaggaaaagatggacctggacgacaag
gaagacgacgagacgaaggagcttgaggagcgactcaagaaggagtacaagaacgcgaac
aagctccgtgagggccacatagatgaatcagacgaagaggaggaagagacccagctgact
ggggcgggcaagaacctccagaagaccctgaagaagctggacaaggatggcgcatacgac
gactccgacgacgagaagaacccgtatgcaagcgaggaggaagaggaggaggaagagatc
cccattgcgcctaccggtcctgcgattcagcctgtcgagcccaagccgggcgcgcgatcg
gcgtcccagacgtcaccggtcctgcaagcgggcaagcccacggcaaacggacagccaccg
tccacgcccaagacggaaccgctgccacaatcaatctcgcggccgacgtctcccgcgccg
gcaccggggcacggaggccattccgttgtcgcgaggcgggctacgagcccgaagatgccc
aaactgaaaacggccatcccgagccgcgcgggaagcccactcgcgagccccaacggagcg
tcgcctccagccagtcgcgcgacgagcccgactgctggcagcccccctccggcaccatct
gcgtccgggggtgcgaaggccctcaagcgcaaggcgacagacgacgggtctgcgggcgcc
gcggggggtgcgccgggcagcgtgccccgcctgaagaagcgcaaggcgcagctgccgccg
ggcgcagagctcgaggaccgcatggtcatcgagtggctgcgggcgacgccgagcgcatcg
acgcgcgagtgcatcctgcactttacgccgtacctgacgaacgaggagaagaagaacaag
ttcacggcgctcgtgaaggaggtcgcgcagctcagcaagggcgtgctcgtgctgaggccc
gcgtaccgcggtgctgcgaccgcgccctcgccggcagcgtag
DBGET
integrated database retrieval system
