Trametes versicolor: TRAVEDRAFT_28180
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Entry
TRAVEDRAFT_28180 CDS
T04795
Name
(RefSeq) PRP38-domain-containing protein
KO
K12849
pre-mRNA-splicing factor 38A
Organism
tvs
Trametes versicolor
Pathway
tvs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRAVEDRAFT_28180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvs03041
]
TRAVEDRAFT_28180
Spliceosome [BR:
tvs03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
TRAVEDRAFT_28180
Complex C
U4/U6.U5 tri-SnRNP related factors
TRAVEDRAFT_28180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
HEAT_2
Motif
Other DBs
NCBI-GeneID:
19412960
NCBI-ProteinID:
XP_008036127
JGI:
28180
LinkDB
All DBs
Position
Unknown
AA seq
300 aa
AA seq
DB search
MANTTVRGATAIHGQNPQYLVESVIRNRIYESVFWKEHCFALTAETIIDKTIELKSIGGV
YGNQKPTEFLCLLLKLLQIQPEKEILLEYLQADEFKYLRALAAFYIRMTFRPADVYEVLE
PLLKDYRKIRYRGMGGYSIVHMDEFIDQLLNEERVCDLILPRLTKRDVLEELDEIGPRKS
RLLDAMEGKSEHGSQKSRSRSRSSDRSGGSRSPSGTRNRSASGSPGRGRSLSRGSKSPSP
AGSRYVSRSRSRSRSGSGSPYRSRSRSISPDRLNGSAGGSPARFRSRSRSISPDRMDTTG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaccaccgtacgcggcgcgaccgccatccatggccagaaccctcagtaccta
gtcgaatctgtcatccgcaaccgcatatatgagtcggtcttctggaaggagcattgtttc
gcgctgactgcggaaactattatcgacaagacgatagagctcaagtcaattggcggcgtc
tatggcaaccagaagccaacagaattcctctgcttgctgttgaagctcctacaaatccaa
ccggagaaggagatattactggagtatctacaagcggatgagttcaagtatctgcgcgcc
ctggcggccttctatatacgaatgacgttccgaccggccgacgtctatgaagtcctcgaa
ccattactcaaggactatcggaagatacgatatcgaggaatgggcggttactctatcgtt
cacatggacgaattcatcgaccaactactgaacgaggagcgtgtatgcgatctcatccta
ccccggctcacaaagcgcgacgtcctcgaggagctcgatgagataggcccgaggaaaagt
cgcttgctggacgctatggagggtaaaagcgagcacggcagccagaagagccgcagtagg
agtcggagcagcgaccgaagcgggggatcgcggagtccaagtggcactcggaatcgttct
gcttcagggagcccaggtagaggccgcagtctcagtcgggggagcaagtcgccctcgcct
gctgggtcgcggtatgtttctcgtagccgaagccgctctcgatctgggtctggctccccg
taccggtcgcgcagtcgcagcatctctcccgaccgtctcaatggttcggcgggcggttca
ccagcgcggttccgttcacgtagtcgcagcatctctcctgaccgtatggacactacgggc
tga
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