Trametes versicolor: TRAVEDRAFT_30260
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Entry
TRAVEDRAFT_30260 CDS
T04795
Name
(RefSeq) glycoside hydrolase family 13 protein
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
tvs
Trametes versicolor
Pathway
tvs00500
Starch and sucrose metabolism
tvs01100
Metabolic pathways
tvs01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
TRAVEDRAFT_30260
Enzymes [BR:
tvs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
TRAVEDRAFT_30260
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Alpha-amylase
A_amylase_dom_C
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
19413306
NCBI-ProteinID:
XP_008040112
JGI:
30260
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MLRLALLTSLLATSAFAASADEWRNRTIYQVITDRFATSDGSSPSCDTSQRQYCGGTWKG
LVGKLDYIQNMGFDAVWISPVVANVEGNTTYGEAFHGYWTQDINSLNSHFGTADDLKSLS
TALHNRGMYLMVDVVVNHMVGTADPPNFSAFQPFSSQSDFHSECFVSNYDNQTEVEQCWL
GDKNVPLVDINTEDNDVVTTMNNWISTLVSNYSVDGVRIDTVKHVRKDFWPDFAKSAGVF
TIGEVLNNETSYVSAYTQVIDAVLDYPSWFPLVAAFQTSNGNLSALAATVQQAQSSYKDG
EFMTGAFLENHDQPRFQSLTQDSALIKNAMTWPFVQDAIPILYYGQEQSYAGGADPANRE
ALWLSGYVEDKPLVTHVKTLNAARKAAIAANSSFLTTAVKFPSSGSDSTMAILKPPMLAL
LSNGGSSSTPKWTVSDAGFQANEELVDVLTCTKMNADSNGGVTVQGSGGSPQVLIPTSAL
STAGTTCSSLATVTQTSSARGWVDGAADSLPVLAALVLAVWAAQSSLVL
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgttacgacttgcactccttacgtctctccttgcgacttctgcgttcgccgcgtccgca
gatgaatggcgcaaccgcacgatctaccaggtgatcaccgatcgtttcgccacctccgat
ggctccagcccctcctgcgacacatcccagcgacaatactgtggcggtacctggaagggc
cttgtcggcaagctcgactacatccagaacatgggctttgacgccgtctggatttcgccc
gtagtcgcgaacgtcgaagggaacaccacctatggcgaggctttccacgggtactggacc
caggacatcaactcgctgaactcccatttcggcactgccgatgacctcaagtcgctgagc
actgccctgcacaaccgcggcatgtacctcatggtcgatgtcgtcgtcaaccacatggtc
ggaaccgcggatcctcccaatttctcggccttccagccgttctcctcgcagtccgacttc
cacagcgaatgcttcgtctccaactacgacaaccagaccgaggtcgagcagtgctggcta
ggcgacaagaacgtcccgctggttgacatcaacaccgaggacaacgacgttgttactaca
atgaacaactggatttcgacccttgtcagcaactacagcgtggacggtgtccgcatcgac
acggtcaagcacgtccggaaggacttctggccggactttgccaagtccgccggcgtcttc
acgatcggcgaggttctgaacaacgagacgagctatgtttcagcatacactcaggtcatc
gacgctgttcttgactacccgtcctggttcccgcttgttgccgctttccagacctcgaac
ggcaacctctcggcgttggcagccactgtgcagcaggcccagagttcgtacaaggacggc
gagttcatgactggcgcgttcctcgagaaccacgatcagccccggttccagtcgcttacc
caggacagtgcattgatcaagaacgccatgacttggccgtttgtgcaagacgcgatcccg
atcttgtactacggtcaagagcaatcctacgctggaggcgccgatcctgccaaccgcgaa
gctctctggttgtctggctatgttgaagacaagcccctcgtgacccacgtcaagacgctg
aatgccgctcgcaaggccgcgatcgccgcgaacagctccttcctgaccactgcggtgaag
ttcccgtcgtcgggctcggattccaccatggccatcctgaagccgcccatgctcgcactg
ctttccaacggcggaagttcatcgacgccgaaatggaccgtgtctgatgcgggcttccag
gccaacgaggagctcgtagatgtcctcacttgcaccaagatgaatgcagatagcaacggc
ggtgtcaccgtccaaggatctggaggcagcccgcaggtcctcatcccgacttccgcgctg
agcaccgccggcaccacgtgctcgagcctggcgactgtcacccaaacgtcttctgcccgt
ggatgggtcgatggtgcagcggattctcttccggtgcttgccgcgctcgtcctggccgtc
tgggctgcccagtcgagcctcgtgttgtaa
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