Trametes versicolor: TRAVEDRAFT_31057
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Entry
TRAVEDRAFT_31057 CDS
T04795
Name
(RefSeq) RBP11-like subunits of RNA polymerase
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
tvs
Trametes versicolor
Pathway
tvs03020
RNA polymerase
tvs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TRAVEDRAFT_31057
09124 Replication and repair
03420 Nucleotide excision repair
TRAVEDRAFT_31057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvs03021
]
TRAVEDRAFT_31057
03400 DNA repair and recombination proteins [BR:
tvs03400
]
TRAVEDRAFT_31057
Transcription machinery [BR:
tvs03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
TRAVEDRAFT_31057
DNA repair and recombination proteins [BR:
tvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
TRAVEDRAFT_31057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Rio2_N
Motif
Other DBs
NCBI-GeneID:
19413457
NCBI-ProteinID:
XP_008041826
JGI:
31057
LinkDB
All DBs
Position
Unknown
AA seq
139 aa
AA seq
DB search
MNAPNRYELYVLEEGERPVEVTEDTKIPNAATVKIVKQDHTLANLLRSQLLSMPQVTFAG
YKVPHPLHPYFLLKIQTDGSVTPTQVLETACTKLIGTIATLEAKFKREFTYNADGAVQED
AYGVPVTGDGLEGRNYIDF
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcacccaaccgttatgagctctacgttctcgaagagggcgagcgaccagttgag
gttacggaggacacgaagatccccaacgctgctaccgtcaagatcgtgaagcaggaccat
acccttgcaaacctactccgttcccaactcctctctatgccgcaagtcaccttcgccggc
tacaaagttccccacccgctccatccctacttcctgctcaagatccagacggacgggtct
gtgacgcccacgcaggtcctcgagaccgcatgcacgaagctcatcggcacgatcgcgacg
ctcgaggcgaagtttaagcgcgagttcacctacaacgccgacggcgccgtgcaggaggac
gcgtacggagtgcccgtcaccggcgacggcctcgagggccggaactacatcgacttctag
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