Trametes versicolor: TRAVEDRAFT_32061
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Entry
TRAVEDRAFT_32061 CDS
T04795
Name
(RefSeq) WD40 repeat-like protein
KO
K14299
nucleoporin SEH1
Organism
tvs
Trametes versicolor
Pathway
tvs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TRAVEDRAFT_32061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvs03019
]
TRAVEDRAFT_32061
04131 Membrane trafficking [BR:
tvs04131
]
TRAVEDRAFT_32061
Messenger RNA biogenesis [BR:
tvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TRAVEDRAFT_32061
Membrane trafficking [BR:
tvs04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
TRAVEDRAFT_32061
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR3_2nd
Ge1_WD40
Beta-prop_WDR75_2nd
Beta-prop_WDR35_TULP_N
EIF3I
WD40_MABP1-WDR62_2nd
TFIIIC_delta
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
19413643
NCBI-ProteinID:
XP_008044672
JGI:
32061
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MIQTGLISNAHSDLVTDASYDFYGLRLATCSLDQRVKVWQLDETTGSWSLEHDWKAHDAA
ISKVSWAHPEFGTILATASFDRTVKVWEQVSAAAPDADGGASSSASASRWAERAMLVDAK
GTVRAVEFAPSHFGLKLATISSDNCLRIYECLEQPSLAAWQLIEEVDVLSLPISASPAAR
SVAQTLSLATPTQTASAPLDSASVSLVAHALQQQAAQNQNQLPGRPGLGTREADGGWSIS
WCKDKYWGEIIAAGCGIDGIVKIIQVTPSRRPSSLLSLNPAPASSAPSASDPSIKSPAAA
THGSSGAGSGDGWTGAKTCAVTSIAWAPSCGRSYHLVATGARDGHVRIWRVKPPTPSEDL
DAGAEEGDGAQWTASIVGDFDDHKSAVGRVEWNITGTVLSSAGNDGRVRLWKMTAGNVWR
PAGHISVEQAEEQQGDVDMGDVAVDD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgatacaaactgggctgatatcgaacgcgcacagcgacctggtgacagacgcgtcctat
gatttctacggcctccgcctcgccacctgcagtctcgaccagcgggtcaaggtctggcag
cttgacgaaaccacgggttcatggtcgctcgagcatgactggaaggcgcacgacgccgcg
atctcaaaagtgagctgggcgcaccccgaattcggcacgatcctcgccaccgcgtccttc
gaccgcaccgtcaaggtctgggagcaggtctccgccgcagccccggacgcggacggcggc
gcgtcgtccagcgcgtccgcctcgcgctgggcggagcgcgcgatgctcgtcgatgccaag
ggcaccgtgcgcgccgtcgagttcgccccatctcactttggcttgaagttggcaacgatc
tcgtcggacaactgcctgcgcatatacgagtgcctcgagcagccttcgctcgccgcgtgg
cagctcatcgaggaggtcgacgtcctctcgctccccatttcggcgtcgcccgccgcgcgc
tctgtcgcgcagacgctctcgctagccacgcccacgcagaccgcctctgcgccgctcgac
agcgcgtcggtctcgctcgtcgcgcacgcgctccagcaacaggccgcgcagaaccaaaat
caactgccagggagaccgggcttgggcacgcgcgaggcggatggcggctggtccatatcg
tggtgtaaagacaagtactggggtgaaatcatcgcggcggggtgtggcatcgacggtatc
gtgaagatcatccaagtcaccccttcgcgccgaccatcatcactgctcagcctcaacccc
gcgcccgcgtcctccgcgccctcggcctcagatccgtctatcaaatcacccgcggcagca
acacatgggtccagcggcgcaggatcaggcgacgggtggaccggggcgaagacgtgcgcg
gtgacgtccatcgcgtgggcgccgtcgtgcggccgctcgtaccacctcgtcgcgaccggc
gcgcgcgacgggcacgtgcggatctggcgcgtcaagccgcccacgccgagcgaggacctc
gacgctggggcggaggagggcgacggcgcgcagtggacggcgagcattgtgggcgacttt
gacgaccataagtcggcggtggggcgggtggagtggaatatcactgggaccgtgctctct
tcagcaggaaacgacggtcgggtccggttgtggaagatgacggcagggaacgtgtggcga
cccgcaggacacatcagcgtcgaacaggccgaggagcagcagggcgacgtcgacatggga
gacgtagcggttgacgactaa
DBGET
integrated database retrieval system
