Trametes versicolor: TRAVEDRAFT_36048
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Entry
TRAVEDRAFT_36048 CDS
T04795
Name
(RefSeq) DNA repair protein SNF2 family
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
tvs
Trametes versicolor
Pathway
tvs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TRAVEDRAFT_36048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvs03400
]
TRAVEDRAFT_36048
DNA repair and recombination proteins [BR:
tvs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
TRAVEDRAFT_36048
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Rad54_N
Helicase_C
ResIII
HDA2-3
ERCC3_RAD25_C
U1snRNP70_N
FAM192A_Fyv6_N
Motif
Other DBs
NCBI-GeneID:
19413978
NCBI-ProteinID:
XP_008036193
JGI:
36048
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MLRRAPVTPDGKVMDRFQESSRINKPFKPPTPAAGTREQPQRKRKRVSYKDAQRGSDDSG
SENEGAPKKKKKSGGKNDGFERPLDNNIKHYPVYKPKPFGQISHRFSIPEMRNKDGDVIP
TVQTNIALGIRPLANIIPRPLHDPMEDHAIVLYDPTIDDRETDEERKEREKEEAKEKALK
EAQEKCAGMYNPHKSLKELLGGGKDKKRHAHKVPVVIDPRLTKVLRPHQVEGVKFLYRCT
TGMVVENQYGCIMADEMGLGKTLQCIALLWTLLKQSPHAGRPTIEKCIIACPSSLVKNWA
NELVKWLGKDAISALAIDGKGGKAEMLEKVARWVASCGRNVSQPVMIVSYETLRTLSVHL
ANCSIGLLLCDEGHRLKNSESLTFQALNGLNVKRRVILSGTPIQNDLSEYFSLLNFANPN
FLGSKNDFRKNFENAIIRGRDADATDAAKSECEKKLKELGALVAKFIIRRTNDLLSKYLP
VKYEQVVFCKLSDFQLSLYRLFISSPEIQALLRGAESQPLKAINILKKLCNHPELLDLPG
DLRGCEKLLPEGYAGAGATGRDKGRNQGVNCEWGGKFLVLERFLHRIHTETNDKIVLISN
YTQTLDLFEKLCRSKKYGHFRLDGTMTINKRQKLVDSFNDPNGKEFIFLLSSKAGGCGIN
LIGANRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQANKQAL
SSAVVDEKEDAERHFSIDALRKLFLFNENTLCETHETFKCKRCKEGRQFVKSKALLYGDA
STWNHFTNAELRNNHDDLLRGETGLPEVSFAFQYISH
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgttacgacgtgccccagtgacgccagatggcaaggtcatggaccggttccaggagagc
tctcgcatcaacaagcctttcaagccacccactcccgccgctggcactcgagaacagcct
caacgcaaacgcaaacgcgtttcctacaaggacgcccagcgcggctcagacgactcggga
agcgagaatgagggtgcgcccaagaagaagaagaaatcgggcggcaaaaatgacggcttt
gaacgacctcttgacaacaacatcaagcactaccccgtatacaagcccaagcctttcggc
caaatatcccatcgcttctctatacccgagatgcgcaacaaggacggggacgtgataccc
actgtacagaccaacatcgctcttggtatccggccgcttgcgaatatcattcctcggccg
ctccacgatcctatggaggaccatgctatcgttctctatgatcccaccatcgacgacaga
gagaccgacgaggagcgcaaggagcgcgagaaggaggaagccaaagagaaggcgctcaag
gaagcccaggagaagtgtgctggtatgtacaacccgcacaagagcctgaaggagctcctt
gggggtggcaaggacaagaagcggcatgcgcacaaggttccggtcgtcatcgacccacgc
ttgaccaaggtgctacggccccatcaagtcgagggtgtcaagttcttgtatcggtgcaca
accggcatggtcgtggagaatcaatacggctgcattatggccgacgagatgggtctgggc
aagaccctacagtgtatcgctcttctctggactctgctcaagcaatcgccgcatgctgga
cgtcctactatcgagaagtgtatcattgcttgtccctcaagtttggtgaagaactgggcg
aacgaactagtgaagtggctagggaaggacgcaatttctgcattagctatcgacggaaag
ggaggcaaagccgagatgctggagaaagtcgcccgctgggttgcgtcttgtggacgcaac
gtctcgcagccagtgatgattgtatcctacgagaccctacgtactttgtccgtacatcta
gccaactgctcgatcggcctgcttctctgcgatgagggccatagactgaagaactctgaa
tcgttgacgttccaggctttgaacggtctcaacgtcaagcggcgagtcattctgtctggg
actcccatccagaacgatctttcggagtacttctcgcttctcaacttcgccaacccgaat
tttttgggatcaaagaacgatttccgaaagaatttcgagaatgctatcattcgtggccgc
gacgcggacgcaacagatgctgcgaagagcgaatgcgagaagaaactcaaggaacttgga
gctttggtcgctaaattcatcattcggcgcacgaacgacctgctgtcgaagtatctgccc
gtcaaatacgagcaagtcgtgttctgcaagctttcggacttccaactgtcactctaccgg
ctcttcatatcttcgcctgagattcaagcactgctccgtggggctgaatcgcagccgctc
aaggcgatcaacatcctcaagaagctttgcaaccacccagaactgcttgacttgcctggt
gaccttcgaggttgcgagaagcttctccctgaagggtacgccggcgccggtgccacagga
cgagacaagggccggaaccagggcgtgaactgcgagtggggaggcaagttcctggtgctc
gagcggttcctccaccgcatacatacggaaacgaacgacaagatcgtcttgatcagcaat
tacacccagacactggacttgttcgagaaactgtgtcgcagcaagaagtatggtcacttc
cgcctggacggcacgatgacgatcaacaagcggcagaagctggtcgactcgtttaacgac
cccaacggcaaggagttcatcttcctgctgagtagtaaggctggtggatgcggtatcaac
ctcatcggcgcaaaccgacttatcctcttcgaccccgactggaacccggcggcagatcaa
caggctctcgcccgagtatggcgtgacggccagaagaaggaatgcttcgtgtaccgcttc
atctccaccggcacaatcgaggagaagatcttccagcggcaggcgaacaagcaggcgctc
tcgtccgcggtcgtcgacgagaaggaggacgcggagcggcacttctcgatcgacgcgctc
cgcaagctgttcctcttcaacgagaacacgctgtgcgagacgcacgagacgttcaagtgc
aagcgctgcaaggaggggcggcagttcgtcaaatcgaaggcgctgctgtatggcgacgcg
agcacgtggaatcacttcacgaacgcggagttgagaaataatcacgatgacctgctgcgt
ggggagacggggctgcccgaggtgtccttcgcgttccagtacatcagtcattag
DBGET
integrated database retrieval system