KEGG   Trametes versicolor: TRAVEDRAFT_37288
Entry
TRAVEDRAFT_37288  CDS       T04795                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K14855  ribosome assembly protein 4
Organism
tvs  Trametes versicolor
Brite
KEGG Orthology (KO) [BR:tvs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tvs03009]
    TRAVEDRAFT_37288
Ribosome biogenesis [BR:tvs03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    TRAVEDRAFT_37288
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_TEP1_2nd WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WD40_MABP1-WDR62_2nd WDR55 ANAPC4_WD40 DSE1_N Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd CFAP251_N Beta-prop_EML ASA1 Beta-prop_WDR75_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_EIPR1 NLE NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_NOL10_N Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_Nup120_160 Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_NWD2_C Tricorn_N
Other DBs
NCBI-GeneID: 19414066
NCBI-ProteinID: XP_008038240
JGI: 37288
LinkDB
Position
Unknown
AA seq 498 aa
MATLLPPPKRQKVYHGIAPPEPELLQPSPHIVVQFVSEEDGQPLAPAVNLPANVSREGLE
AIVNKLNTKDEDPVPFAFHIALPADATTPGAPTRIAIAKSIEEDILSHPSHAFTSEDVFV
IHCSPQAVFKVRPATRCSSTLSGHTSPILCASFSPTGNLLATGSGDCNARLWDLGTETPS
HVLSGHKGWVLCVEWEAMERKLATGGHDGHVRLWDPKTGTAIGDALKGHTKWVTSLSWEP
IHLNPSAPRLASSSKDGTVRVWSTLTRRCEYTLGGHTASVNVVRWGGGGLNGKGVLYTAS
SDRTVRIWDAESGRPLHTLKDHAHWVTTLTLNTDFVLRTGPFDHLGKKTSSDTEAQELAL
KRYNALVATAGELLITGSDDHTLFLWSLFPSRTASADASGDAAERGGKLKPLARLTGHQR
QVSHVAFSPDGRWAASAAWDNSVRVWDGRTGKFVATLRGHVAAVYRLAWSADSRLLVSAS
KDSTLKNTVASLDLPSLE
NT seq 1497 nt   +upstreamnt  +downstreamnt
atggcgacgctacttccacccccaaaacgacagaaggtctaccacggcatcgcgccgcca
gagccagagctgcttcagccttcgccgcacatcgtagtgcaatttgttagtgaagaggac
gggcagccgcttgcgcctgccgtcaatctcccggcaaacgtctcgcgagagggcctcgag
gcgattgtaaacaagctcaacacaaaagacgaggacccggtccccttcgcgttccacata
gcactccccgcagacgcaacaacgcccggcgcgcccacccgcatcgcgatcgcgaaatcc
atcgaagaggatatcctctcgcatccctcgcacgctttcacgtccgaagacgtcttcgtt
atacactgttctccgcaagccgtcttcaaagttcggccggcaacacggtgctcatctacg
ctctcggggcacacctcccccattctatgtgcctcattttctcccactggcaaccttctg
gcgacaggttccggcgactgcaatgctcggctatgggatcttggcacggagacgccgtct
catgttctttcggggcacaagggatgggttctttgcgtcgagtgggaagctatggagcgg
aagctcgctacgggtgggcatgatggacatgtcagactatgggatcccaagaccggcacg
gcaataggcgacgccctcaagggccacacaaaatgggtgacttccctctcctgggagcca
atacacctgaacccctctgctccacgactagcttcttcatcgaaggatggcactgtccgc
gtatggtccacacttacccgaaggtgtgagtacaccctcggtggtcacaccgctagtgtg
aacgtcgttcgatggggtggcggcgggctgaatggaaagggcgtgctctacactgcgtcc
agcgaccggacagtccggatatgggacgccgagagcggacgaccattgcacacgctcaaa
gatcatgcacactgggtgacgacactcacgctcaacaccgacttcgtgctgcgcactggt
ccgttcgaccatttagggaaaaagacgagttcggacaccgaagcccaggagctcgcgctg
aaacgctacaacgcactcgtcgcgaccgccggcgagctgcttatcaccggctcggacgac
cacacgctcttcctgtggtcgctcttcccttcgcgcaccgcgtctgccgatgcgtcgggc
gacgcggctgagcgtggagggaagctgaagcctctcgcgcgcttgacaggccaccagagg
caggtctcgcacgtcgcattcagccccgacggacggtgggcggcgagtgcggcgtgggac
aacagcgtgcgcgtgtgggatgggcgcacgggtaagttcgtcgccacgctgcgcgggcac
gtcgcggcagtgtaccgccttgcgtggagcgcggactcaagactgctcgtcagtgcgagc
aaagatagcacgttgaagaatacggtggcatcgctcgatttgccgtccctggaatga

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