Trametes versicolor: TRAVEDRAFT_37288
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Entry
TRAVEDRAFT_37288 CDS
T04795
Name
(RefSeq) WD40 repeat-like protein
KO
K14855
ribosome assembly protein 4
Organism
tvs
Trametes versicolor
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tvs03009
]
TRAVEDRAFT_37288
Ribosome biogenesis [BR:
tvs03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
TRAVEDRAFT_37288
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
ANAPC4_WD40
DSE1_N
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
CFAP251_N
Beta-prop_EML
ASA1
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_EIPR1
NLE
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_NOL10_N
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_Nup120_160
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_NWD2_C
Tricorn_N
Motif
Other DBs
NCBI-GeneID:
19414066
NCBI-ProteinID:
XP_008038240
JGI:
37288
LinkDB
All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
MATLLPPPKRQKVYHGIAPPEPELLQPSPHIVVQFVSEEDGQPLAPAVNLPANVSREGLE
AIVNKLNTKDEDPVPFAFHIALPADATTPGAPTRIAIAKSIEEDILSHPSHAFTSEDVFV
IHCSPQAVFKVRPATRCSSTLSGHTSPILCASFSPTGNLLATGSGDCNARLWDLGTETPS
HVLSGHKGWVLCVEWEAMERKLATGGHDGHVRLWDPKTGTAIGDALKGHTKWVTSLSWEP
IHLNPSAPRLASSSKDGTVRVWSTLTRRCEYTLGGHTASVNVVRWGGGGLNGKGVLYTAS
SDRTVRIWDAESGRPLHTLKDHAHWVTTLTLNTDFVLRTGPFDHLGKKTSSDTEAQELAL
KRYNALVATAGELLITGSDDHTLFLWSLFPSRTASADASGDAAERGGKLKPLARLTGHQR
QVSHVAFSPDGRWAASAAWDNSVRVWDGRTGKFVATLRGHVAAVYRLAWSADSRLLVSAS
KDSTLKNTVASLDLPSLE
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgctacttccacccccaaaacgacagaaggtctaccacggcatcgcgccgcca
gagccagagctgcttcagccttcgccgcacatcgtagtgcaatttgttagtgaagaggac
gggcagccgcttgcgcctgccgtcaatctcccggcaaacgtctcgcgagagggcctcgag
gcgattgtaaacaagctcaacacaaaagacgaggacccggtccccttcgcgttccacata
gcactccccgcagacgcaacaacgcccggcgcgcccacccgcatcgcgatcgcgaaatcc
atcgaagaggatatcctctcgcatccctcgcacgctttcacgtccgaagacgtcttcgtt
atacactgttctccgcaagccgtcttcaaagttcggccggcaacacggtgctcatctacg
ctctcggggcacacctcccccattctatgtgcctcattttctcccactggcaaccttctg
gcgacaggttccggcgactgcaatgctcggctatgggatcttggcacggagacgccgtct
catgttctttcggggcacaagggatgggttctttgcgtcgagtgggaagctatggagcgg
aagctcgctacgggtgggcatgatggacatgtcagactatgggatcccaagaccggcacg
gcaataggcgacgccctcaagggccacacaaaatgggtgacttccctctcctgggagcca
atacacctgaacccctctgctccacgactagcttcttcatcgaaggatggcactgtccgc
gtatggtccacacttacccgaaggtgtgagtacaccctcggtggtcacaccgctagtgtg
aacgtcgttcgatggggtggcggcgggctgaatggaaagggcgtgctctacactgcgtcc
agcgaccggacagtccggatatgggacgccgagagcggacgaccattgcacacgctcaaa
gatcatgcacactgggtgacgacactcacgctcaacaccgacttcgtgctgcgcactggt
ccgttcgaccatttagggaaaaagacgagttcggacaccgaagcccaggagctcgcgctg
aaacgctacaacgcactcgtcgcgaccgccggcgagctgcttatcaccggctcggacgac
cacacgctcttcctgtggtcgctcttcccttcgcgcaccgcgtctgccgatgcgtcgggc
gacgcggctgagcgtggagggaagctgaagcctctcgcgcgcttgacaggccaccagagg
caggtctcgcacgtcgcattcagccccgacggacggtgggcggcgagtgcggcgtgggac
aacagcgtgcgcgtgtgggatgggcgcacgggtaagttcgtcgccacgctgcgcgggcac
gtcgcggcagtgtaccgccttgcgtggagcgcggactcaagactgctcgtcagtgcgagc
aaagatagcacgttgaagaatacggtggcatcgctcgatttgccgtccctggaatga
DBGET
integrated database retrieval system