Trametes versicolor: TRAVEDRAFT_37590
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Entry
TRAVEDRAFT_37590 CDS
T04795
Name
(RefSeq) delta DNA polymerase
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
tvs
Trametes versicolor
Pathway
tvs03030
DNA replication
tvs03410
Base excision repair
tvs03420
Nucleotide excision repair
tvs03430
Mismatch repair
tvs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TRAVEDRAFT_37590
03410 Base excision repair
TRAVEDRAFT_37590
03420 Nucleotide excision repair
TRAVEDRAFT_37590
03430 Mismatch repair
TRAVEDRAFT_37590
03440 Homologous recombination
TRAVEDRAFT_37590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvs03032
]
TRAVEDRAFT_37590
03400 DNA repair and recombination proteins [BR:
tvs03400
]
TRAVEDRAFT_37590
Enzymes [BR:
tvs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TRAVEDRAFT_37590
DNA replication proteins [BR:
tvs03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
TRAVEDRAFT_37590
DNA repair and recombination proteins [BR:
tvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
TRAVEDRAFT_37590
MMR (mismatch excision repair)
DNA polymerase delta complex
TRAVEDRAFT_37590
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
divDNApol
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
19414095
NCBI-ProteinID:
XP_008038269
JGI:
37590
LinkDB
All DBs
Position
Unknown
AA seq
1066 aa
AA seq
DB search
MDSQPATKKRRINASGAASTQPLQSSFADVLQRLKEDANETRDAEGGADAWARPALPPIN
PKRDSIIFQQIDIEDSVEQQTGGTTLRMFGVTQDGHSVLAHITDFLPYFYIATPRGFGNE
DVGPFMRYLNNAVPGGLVRDMELTKKRSLWGYKGDDWVSFIKITVADQRSLPKVRDKSSD
SPRLLERGECRFNDLFNGEVATFESNIAYTLRFMIDTRVVGMNWIEVPAGQYIILEGKDK
RSHCQLELSVKWNKFISHAPDGQWSKTAPLRILSFDIECAGRKGIFPEAQVDPVIQIANM
VTRQGESKPFIRNVFTLNTCAHIVGSQVISFQNEAELLLKWREFVEEVDPDVVIGYNISG
FDLPYLIDRAKALKAQKFPYLGRMTNKQTVTKDTHFSSKAFGQRDSKETALDGRLQIDIL
QYMQREYKLRSYTLNSVCAQFLGEQKEDVHHSVITDLQNGTPESRRRLAVYCLKDAYLPQ
RLMDKLMCFINYTEMARVTGVPFNFLLSRGQSIKVLSQLFRKANDDGYIVPALRGEGSDE
QYEGATVIEPKKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLDKSTVERLKLVKDVDYI
QTPNNDLFVKSTRRKGLLPTILEELIGARKRAKADLKKETDPFKRAVLDGRQLALKISAN
SVYGFTGATIGKLPCLPISSSTTSYGRQMIEKTKQEVEAEYCIANGHSHDATVIYGDTDS
VMVRFGPTDLPTVMRMGSEAADFVTAKFIKPIKLEFEKVYFPYLLISKKRYAGLYWTRPE
KYDKMDTKGIETVRRDNCRLVSTVIETCLHKMLIDRDVGGAEDYVKQTISDLLQNKVDMS
QLVITKALSKTDYASKQAHVELAERMKKRDAGSAPALGDRVAYVIIKGAKGAAAYEKSED
PIFVLENSIPIDTKYYLENQLSNPLMRIFEPILGDKASSLLSGDHTRTIQVATPTVGGLM
KFAVKTATCLGCKTPLRANNSVKNGAVCNNCRPRLGEFYQKQITTTSELQVRFSRLWTQC
QRCQGSLHQDVLCSSRDCPIFYMRKKAQKDVEDASSVLDRFEGELW
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggactcacagccagctaccaagaaacgcaggatcaacgcgtcaggcgctgcttccacc
cagcctttgcagtcgtcattcgcagacgtcctgcagcgactgaaggaagacgcgaacgaa
acgcgggatgcggagggcggtgcggatgcttgggcgcgtcccgctcttccaccaataaac
cctaagcgggacagtatcatcttccagcagatagatatcgaggattcagtagagcagcag
actggcggtacaactctcaggatgttcggtgtgacacaagacggtcacagtgtccttgcg
catatcacagactttcttccgtacttctacattgccaccccacgaggtttcggcaatgag
gacgttggtcctttcatgcggtatctgaacaatgctgtcccaggtggccttgtacgcgat
atggaactcaccaagaagcgtagtctatggggttacaagggagacgactgggtgagcttc
atcaagatcactgtcgcggaccagagaagtctgcccaaagttagagataagtcctcggac
tctccacggctcctagagagaggcgagtgcaggttcaacgacttgttcaacggtgaggtt
gccactttcgagagcaatatcgcctacactctgcgcttcatgattgatacacgggtggtt
ggcatgaactggattgaagtccctgccggccaatatatcatcctcgaaggcaaggacaag
cgttcacactgccaactcgagctcagcgtcaaatggaacaagttcatctcgcatgcgccc
gacgggcaatggtcaaagactgcgccattgcgtatcctcagtttcgatattgagtgtgct
ggccgcaagggtatcttcccagaggcgcaagtcgatcccgtcattcagatcgcgaacatg
gtgacacggcagggcgaaagcaagccattcatccggaacgtgttcacactgaacacctgt
gcgcatatcgttgggtcacaagtcatctcgttccagaacgaggcagagctgctgttgaag
tggcgcgagttcgtcgaagaggtggaccccgacgttgtcatcggctataacatctccggc
ttcgatttgccgtacttgattgaccgcgcaaaagctctcaaggcccagaagttcccatac
ctgggccggatgaccaacaagcagacggtgacgaaggacactcacttctcatccaaagcg
ttcggacagcgtgactcgaaggagactgccctggatggtcggctacagatcgatatcttg
cagtacatgcagcgggagtacaagctccgaagttacacgctcaactccgtctgcgcgcag
ttcctgggcgagcagaaggaagatgtgcaccactcggtcatcacggatctgcagaatggt
acgccggagtcgagaaggcggttggcggtgtactgcttgaaggatgcgtatcttccacaa
cggctaatggacaagctcatgtgcttcattaactacaccgagatggcgcgtgtgacgggt
gtcccgttcaacttcctgctctcccgcggacagtctatcaaggtattgtcgcagctgttc
cggaaggcgaacgacgacggttacatcgtgcccgcgctgaggggcgaagggtccgacgag
cagtacgagggtgcaacggtcatcgagcccaaaaagggctactacgatgtaccgattgcg
acgctcgatttcagttcgctgtacccatccatcatgatggcgcacaatctctgctatacg
acgttgctcgacaagtcgactgtggaacggctgaaactagtcaaagatgtggactacatc
caaacacccaacaacgatctattcgtgaagtcgaccaggcgcaagggtctgctcccgacc
attctcgaagagctgatcggtgctcgtaagcgtgcgaaggcggacttgaagaaggagacg
gatcctttcaagcgtgccgtgctcgacggtcgccagcttgcgttgaagatcagtgccaac
tccgtgtacggctttacgggtgcgacgatcggcaagctaccttgtctaccgatctcctct
agtacgacgtcgtacgggcggcagatgatcgagaagacgaagcaggaggtcgaggcggag
tactgcatcgcgaacgggcacagccacgacgcgacggtcatctacggcgacacggactcg
gtgatggtgcggtttgggccgacggacctgccgacggtgatgcgcatggggagcgaggcg
gcggactttgtgaccgcgaagttcatcaagccgatcaagctcgagttcgagaaggtgtac
tttccgtatctgctgatcagcaagaagcggtatgcgggcctgtattggacgcgcccggag
aagtacgacaagatggacacgaaggggattgagactgttcgtcgtgacaactgtcggctt
gtgtctacggtcatcgagacgtgcttacacaagatgctcatcgaccgcgatgtggggggc
gcagaggactatgtgaagcagaccatctcggatcttttacagaacaaggtcgacatgtcc
cagctggtgatcacgaaggcgctctcaaagacggattatgctagcaagcaggcacacgtt
gaacttgccgagcggatgaagaagcgcgacgcgggttcagctcccgccctgggcgatcga
gtggcatacgtcattatcaagggtgccaagggtgctgcggcgtatgagaagtcggaagac
ccgatttttgtgctggagaacagcattcctatcgacaccaagtactacctcgaaaaccag
ctttcgaatccccttatgcgtatcttcgagcctattctaggggataaggcttcttcacta
ttgtctggcgatcatacgcgcacaatccaagtggcaacgccaacggttggggggctcatg
aagtttgcggtgaagactgcgacttgtctagggtgcaaaacaccgttacgggcgaacaac
agtgtcaagaacggcgctgtatgcaacaactgtcgaccgagactcggggagttctaccag
aaacagatcaccaccacgtcagagctgcaagtgcggttctcgcgcttgtggacgcagtgt
caacgatgccagggctcgttgcatcaggatgtcctgtgttccagtcgagactgcccgatc
ttctatatgcgcaagaaggcgcagaaggacgtggaggacgcgagttcggttctggatcgc
ttcgagggcgagctgtggtag
DBGET
integrated database retrieval system