Trametes versicolor: TRAVEDRAFT_39126
Help
Entry
TRAVEDRAFT_39126 CDS
T04795
Name
(RefSeq) Nrap protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
tvs
Trametes versicolor
Pathway
tvs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TRAVEDRAFT_39126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tvs03009
]
TRAVEDRAFT_39126
Ribosome biogenesis [BR:
tvs03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
TRAVEDRAFT_39126
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D3
Nrap
Nrap_D5
Nrap_D2
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
19414203
NCBI-ProteinID:
XP_008041041
JGI:
39126
LinkDB
All DBs
Position
Unknown
AA seq
1163 aa
AA seq
DB search
MGSGSDQDAEEEAWGGIQAAAAHSHENSAEAGPSGSHILKPPTGEELKKIKDASELFRST
AFKSQVHRRNAPQRPSKYDKSQSLDALLLSIHKLLMELPAIAPQHPLHASRTLSKQGIDV
PYVRPLPTEETNWKVSFEKPSEIMLAGSWITKTAVKAKDFAPFTADLAIEMPSNLFQEKD
YLNSRVFQKRAYYLGVVASAIAKAKFTLRCELFYESISGDPRRTCLVLRPEPDGSHKSSG
KVPIHVRIIPFISESPIPLQRLSPARSNIRATTLKDESKEEPTPLYNTAYMLMTTPRAHL
LHVHALAKNVPSFVDALTLLRVWANQRGYGLGSRMCVRGFEGKGIWWASILDLIVNGEEP
PPAGLGKRGARRKPLGKGLSSYQLFKAALDFLGMIPSTLGTFPRHNFGEEAVFVKSKDGH
RFPPSSYSSHEAVFVDATSSVNLLADVPLASLDTLRYDAQSTLELLDHASISEDTFAPLF
LQEHRDILARFDVVARVDLSSVEMRTVSAQHVADHGSAYSAAVAQLVSTLRRGFGDRAKA
IAVLHASSDVRPTSQALPIQSSIVHVGIILDSEHAFRLVDHGPPAEEQESERTRQFRQFW
GDKAELRRFKDGSIAESVVWDVKNADERARIPAMIMRHLLARHFGLGADAVQTWQTEFDA
LLKLPESISSLYQASSASVGFKSALLAALDEQFPLAVLNVSPVTPALRYTDVFVPATLAI
PSRSALPKRASYLPVMEIIIEFEKSARWPDDLHAIQKMKLAFFERLASILMHAVKGLQAT
VVFGERPERTEIEDEAALDIITADGWAFRARIWHDREATLLDRIINDQPHVPKALRQAKT
GEDARDRQLALHARELYTRRFIHAPRHHRAIAALYHRFPAFANTVRLTKRWFAAHWLLHG
HVSEEAVELLCAHVFLRTGPPFVADAAANAKTFAPGWKERGFAQVIEFLKDWDWTGGLEI
SLDNADQTAGDSSTAPPTTTSKDVAWALKTPFDPRGHMWTSSGPNAVVARRITTIAKATW
ECLNGLETGASTVKAIFHHPTDYYDFVIELNPALSTRYHQKLDADPSVWAPKGKYANAIV
KGAAASIMPSFDPFAMFYGDLSHVYADTVLLFHDPLGGDRIGAVWQPNLRSARPFRALGG
FSSIPSQKRLGSTLVAKIVPRDT
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaggcagcgaccaggacgcagaagaggaggcctggggtggaatccaggccgcg
gcggcccacagccatgaaaactctgcagaggctggcccatctgggtcgcacatactgaaa
ccgcctactggagaggagctcaagaagatcaaggatgcgtccgaactcttcaggtccacg
gctttcaagtcgcaggtgcatcgacgcaatgctccccaacgtccgtccaaatacgacaag
tcacaatcgttggatgctctcctcttgtctattcacaagctcctcatggagctgcctgcc
atcgcacctcagcatccacttcatgcgtcaagaacgctctctaaacagggcatcgacgtg
ccctatgtgcgcccccttccgacggaagagaccaactggaaggtctctttcgagaagccc
tctgagataatgttggcaggcagctggatcacgaagactgccgtaaaggccaaggacttc
gctccattcacggccgatctcgcaatagagatgccttcgaatctatttcaggagaaagac
tatctcaacagccgagtcttccaaaaacgcgcctactacctaggtgtcgtcgcttctgcg
atcgctaaggcgaagttcactcttcgttgcgagctcttctatgagtccatctctggtgac
ccacgaaggacctgccttgtgctccgtccagaacctgacggctcgcataaaagttcgggc
aaggtccctatacacgtccgcattatccctttcatcagcgagtcgcccatcccgcttcag
cggctatcccccgcgcggtccaatattcgcgcaaccaccctcaaggacgagtccaaggag
gagccgacgcccttgtacaacactgcgtatatgctcatgaccacaccgagagctcacttg
cttcacgtacacgctttggcaaagaacgtgccttccttcgttgatgcactcacactgctc
cgagtttgggcgaaccagcgcggctacggtcttgggagccgcatgtgtgtacgtggcttt
gagggcaagggtatatggtgggcgtcgatcttggatctgattgtcaacggcgaggagccg
cctcctgcgggcctaggcaagaggggcgccagacgcaagcctttggggaagggtttgagc
tcgtatcagctcttcaaggccgccttagatttcctcggtatgattccatcaactcttggc
acgtttccgcgacacaactttggcgaagaggctgtattcgtaaagtcaaaggatggacat
cggttccctcctagcagctattcgagccatgaggctgtcttcgtggatgcgacgtcgtcg
gtcaacctattggcggacgtccctttggcttctctcgatacgttaagatatgacgctcaa
tcaaccttggagctgctggaccatgcttctatatctgaagacactttcgcccctctgttc
ttgcaggagcaccgtgacatcctcgcacgtttcgacgtagtcgcaagggtggacctatcg
tctgtggagatgcgtacagtgtctgcgcaacatgttgccgatcatggctcggcctacagc
gcagcagtcgcacaactcgtctccacgctgcgccgaggtttcggggaccgtgccaaggcc
atagccgtcctccatgcctcttcagacgtccggccgacgtcgcaggctcttccgatacag
tcatctatcgtgcacgtcggaatcatcctcgacagcgagcacgccttccggctcgtcgac
cacggtcctccggccgaagaacaagaaagcgagaggacaaggcagttccggcagttctgg
ggtgacaaggccgagctgaggcgcttcaaggacggctcaatcgcggagagcgtcgtctgg
gacgtgaagaacgccgacgagcgcgcccggatccctgctatgatcatgcgtcatcttctt
gcgcgtcatttcggccttggggcggacgccgtgcaaacttggcaaaccgaattcgacgcg
ctgctgaagctgcccgagtcgatctcgtccctataccaggcttcgagcgcgtcggtcggc
ttcaagtctgcgctcttggcggcgctcgatgagcagttccctctcgcggtgctcaatgtc
agcccggtcacccctgccctccggtataccgacgtcttcgtccctgctacgctcgctatc
ccttctcggtcggcactgcccaaacgcgcgtcgtacctccccgtcatggagatcatcatc
gagttcgagaagtccgcccggtggccagacgatctgcacgccatccagaagatgaagctc
gcgttcttcgagcgcctcgccagcatcctcatgcacgccgtcaagggcctacaagcgacc
gtcgtgttcggcgagcgcccagagcgtacggagatcgaggacgaggccgcgctcgacatc
atcaccgcggacggctgggcgttccgcgcgcgcatctggcacgaccgcgaggcgacgctc
ctggaccgcatcatcaacgaccagccgcacgtccccaaggccctgcgccaggcgaagacc
ggcgaggacgcgcgcgatcgccagctcgccctgcatgcgcgcgaactctacacgcgccgg
ttcatccacgcaccccggcatcaccgcgcgatcgcggcgctataccatcggttcccggcg
tttgcgaacaccgttaggttgacgaagcggtggttcgcggcccactggctgctgcacgga
catgtctctgaggaggcggttgagctgctctgcgcgcatgtgttcttgcgcacggggccg
ccattcgtggcggatgccgctgcgaatgcgaagacgtttgcgccgggctggaaggagcgc
ggcttcgcgcaggtcatcgagttcttgaaggattgggattggaccgggggtctggaaatc
tcgttggacaatgcggatcagactgctggtgactcctcgaccgcgccccctacgaccacc
tcgaaggacgtcgcgtgggcgctgaagacgcccttcgacccacgcggtcacatgtggacg
tcgtcgggcccgaatgctgtcgtagcgcggcgcatcaccaccatcgcaaaggcgacatgg
gagtgtttgaacggtctggagaccggtgcgtcaaccgtaaaggcgattttccaccaccct
accgactactacgacttcgtaatcgagctgaatccggcgctctccactcgctaccaccag
aagctcgacgccgacccgtccgtatgggcgccgaagggcaagtacgcgaacgcgatcgtg
aagggcgcggccgcgtccattatgcccagcttcgaccccttcgcgatgttctacggtgac
ctgtcgcatgtatatgcggacacggtccttctgttccacgacccgctcgggggtgaccgt
atcggtgctgtctggcagcccaacctgcggagtgcacgacccttccgggcgttgggcggc
ttctcgagcataccatcacaaaaaaggctgggcagcactcttgttgcaaagattgtgcct
cgggatacatag
DBGET
integrated database retrieval system
