Trametes versicolor: TRAVEDRAFT_40214
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Entry
TRAVEDRAFT_40214 CDS
T04795
Name
(RefSeq) DNA repair exonuclease
KO
K10865
double-strand break repair protein MRE11
Organism
tvs
Trametes versicolor
Pathway
tvs03440
Homologous recombination
tvs03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TRAVEDRAFT_40214
03450 Non-homologous end-joining
TRAVEDRAFT_40214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvs03032
]
TRAVEDRAFT_40214
03400 DNA repair and recombination proteins [BR:
tvs03400
]
TRAVEDRAFT_40214
DNA replication proteins [BR:
tvs03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
TRAVEDRAFT_40214
DNA repair and recombination proteins [BR:
tvs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
TRAVEDRAFT_40214
BRCA1-C complex
TRAVEDRAFT_40214
NHEJ (non-homologous end-joining)
MRX complex
TRAVEDRAFT_40214
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
TP0546_4th
Motif
Other DBs
NCBI-GeneID:
19414279
NCBI-ProteinID:
XP_008043429
JGI:
40214
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MSDHSEDEREGVPLPTIRNEYADDTVKILLATDNHIGYLERDPIRGQDSINAFKEVLQLA
VKHDVDFILLAGDLFHENRPSRDCLYQVMALLREYTLGDRPIQVELLSDPNDGKPSGYSF
PAINYEDPNLNVSIPVFSIHGNHDDPQGAGPEGALCALDVLSVSGLINYMGKIDLPLDDA
EAQNTGIAIRPVLLRKGNTRLGLYGVGNVKDQRMHFELRSNRVRMYMPRDKDSWFNILLL
HQNRVAHGPQQSVPEGMFDDSIDLVVWGHEHDCRIVPEPVAGKRYYITQPGSSVATSLAD
GEALEKHVALLKIQGKEFELTPIALRSVRPFVIDDVILSDAAEEEGFDINDKIEVTKFLK
TKVNELIEKANREWDERNIRAVAEGEPELPRPLPLVRLKVDTTGVSEMSNPVRFGQEFQG
LLANPRDVLTFHRSKKGTTRASKVKADVPELSIDDPDMSIGEKLSKVRVQTLVREYLAAQ
ELQLLGEGGMSEAIETFVDKDDIHAIQNHVNTALRSLMKGVQATDVEIDEDDFEEVVDKV
RGDHEKKRAEKQEDKPSKNKGKGKATNDDSDASIDSMMMDVDGGGSDFDDQASDEPPPAK
TKAAAKKAAPAKKAPARGKSKAAAKPVSDDDDEIEDEAPPPPKRTNRAAVLSQSTKKAPA
KTPAKKAAAKSSGSKATQSTLSFAPPGRSSTRAAASRAKQKVSETIELDSD
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccacagcgaagacgaacgcgagggtgtaccgctcccgactatccggaatgag
tacgcggatgacaccgtcaaaatcctccttgcgaccgacaaccatattggatatctcgag
cgagaccctatacgtggtcaggattcgataaatgcgttcaaagaggttctccagctcgca
gtcaagcacgatgtcgactttatcctactagcgggagaccttttccacgagaacaggccg
tcaagagactgcctgtatcaagtcatggccctcctcagagagtatacgctcggagaccgc
cccattcaggtcgaactcctgagcgatcccaacgacgggaaaccctcgggatactccttt
ccagccatcaattatgaagaccccaacctcaatgtttccatccccgtcttctccatacac
ggaaatcacgacgatcctcaaggcgctggtcccgaaggcgccttgtgcgcgctcgacgtg
ctttccgtgtcgggcctgatcaactacatgggcaagatcgacctcccgctagacgatgca
gaggcgcaaaatacaggaatcgccatccgacctgttcttctacgcaaaggcaacacccgt
ctcggtctctacggcgttggcaacgtcaaggaccagcgtatgcactttgagctccggagc
aaccgtgtacggatgtacatgccgcgagacaaggatagctggttcaacatcctgttgttg
catcagaatcgagtcgcgcacggtccccagcagtcggtgccagaaggaatgttcgacgat
agcatcgacctggttgtctgggggcacgagcacgactgccgcatcgtgcccgagccggtc
gcggggaagcgatactacattacgcagcccggttcgtccgtcgcgacatcgctcgccgac
ggcgaggccctcgagaagcatgtagcgttgctgaagatccaaggcaaggagttcgagctc
actccgatcgcattgcggagcgtgcggcctttcgtaatcgacgatgttatcctgagcgac
gcggccgaggaggagggcttcgacatcaacgacaagatcgaggttacaaaattcttgaag
acgaaggtcaacgagcttatcgagaaagccaatcgcgaatgggatgagcgaaatatacgc
gccgtcgcggagggcgagcccgaactaccgcgtccgctcccgctcgtgcgcctcaaggtg
gacacgacgggagtgagcgagatgtcgaacccggtgcggtttgggcaggagttccagggc
ctactcgcgaacccgcgtgacgtgcttaccttccaccgctccaaaaagggcacgactcgc
gcgagtaaagtgaaagcggacgtgcccgagctgagcatcgacgacccggacatgagcata
ggcgagaagctgtcgaaggtgcgggtgcagacgctggtgcgggagtacctcgccgcgcag
gagctacagctgctcggcgaaggtgggatgtcggaggcgattgagacgttcgtggacaag
gacgacatccacgcgatccaaaatcatgtcaatacggcgctgcgctcgttgatgaagggt
gtgcaggcgacggatgtggaaatcgacgaggacgacttcgaggaagtcgtggacaaagta
cgcggcgaccacgagaagaagcgtgcggagaagcaagaagacaaaccgtcgaaaaacaag
ggcaagggcaaggcgaccaacgacgactccgacgcttccatagactcgatgatgatggac
gttgacggcggcggatccgatttcgacgaccaggcgtcagacgagccaccgcctgcgaag
acaaaggcagccgcgaagaaggcagcacccgcgaagaaggcacctgcacgtgggaagagc
aaggcagctgcgaagcctgtatctgatgacgacgacgagattgaagatgaggcgcctccg
cctccgaagaggacgaatcgagcggcagttctgagccagtcgaccaagaaagcacccgca
aagactccggcgaagaaggccgcggcgaagtcgtctggtagcaaagcgacgcagtctaca
ctcagcttcgcgccacctggtcgctcctctacgcgtgccgcagcaagtcgcgcgaagcag
aaggtgtcggagacaatagaattggatagcgactga
DBGET
integrated database retrieval system
