KEGG   Trametes versicolor: TRAVEDRAFT_41745
Entry
TRAVEDRAFT_41745  CDS       T04795                                 
Name
(RefSeq) like-Sm ribonucleoprotein
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
tvs  Trametes versicolor
Pathway
tvs03018  RNA degradation
tvs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tvs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TRAVEDRAFT_41745
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TRAVEDRAFT_41745
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tvs03019]
    TRAVEDRAFT_41745
   03041 Spliceosome [BR:tvs03041]
    TRAVEDRAFT_41745
Messenger RNA biogenesis [BR:tvs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     TRAVEDRAFT_41745
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     TRAVEDRAFT_41745
Spliceosome [BR:tvs03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    TRAVEDRAFT_41745
SSDB
Motif
Pfam: LSM KOW7_SPT5 SM-ATX LSM14
Other DBs
NCBI-GeneID: 19414483
NCBI-ProteinID: XP_008032139
JGI: 41745
LinkDB
Position
Unknown
AA seq 85 aa
MASQILPLELIDRCIGSRIWVIMKSEREFTGTLLGFDDFVNMVLEDVTEYEHTPQGRKKT
KLNQTLLNGNNICMLIPGSSGPEDV
NT seq 258 nt   +upstreamnt  +downstreamnt
atggcaagccagatcctcccgctcgaacttattgataggtgtatcggctcccgcatctgg
gtgatcatgaaaagcgagcgggagttcaccggaaccctgctcgggtttgacgactttgtc
aacatggtgctcgaggatgtgacagagtacgagcacaccccgcaaggacgcaagaagacg
aagctcaaccagacgctgcttaacgggaacaacatctgcatgttgatccctggtagctca
ggccccgaggacgtatag

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