Trametes versicolor: TRAVEDRAFT_42560
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Entry
TRAVEDRAFT_42560 CDS
T04795
Name
(RefSeq) MutS family protein MSH4
KO
K08740
DNA mismatch repair protein MSH4
Organism
tvs
Trametes versicolor
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvs03036
]
TRAVEDRAFT_42560
Chromosome and associated proteins [BR:
tvs03036
]
Eukaryotic type
Meiosis-specific proteins
Others
TRAVEDRAFT_42560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_14
PCI
Motif
Other DBs
NCBI-GeneID:
19414612
NCBI-ProteinID:
XP_008032268
JGI:
42560
LinkDB
All DBs
Position
Unknown
AA seq
858 aa
AA seq
DB search
MSRPTTARPQNAASSRGPEGSFIIAVLEGRGVGREVGMAALDKDTGRVALIQLADCPTYV
KTLHQMHIHSPAMILVPDTFFSPTDISMPAGGNKSHSTSLLVQCITDEFEGVPIEPVMRR
YWNENAGLEFLNQLTIDDDERAATLVAVSNKYYALSAASALFKHTELRLNTRYVANSLLI
RYTQVEGTMLIDSGTARNLELVGNMSTRKSAHSLFGLLNHTFTPMGARLLRVNILAPITV
KSALEARLDVVEELIQTEDRFNEVKNAMKPLSKLDLDKLISSLASSEVRETSSAKSASAR
VAQMLNLRSIVQSLPRLAKALDGSRAQLLQIIAEMISDERLYKIDELVRASLNDEAAPAK
GGLNAVNARVYAVKANYNRLLDVARETYKENVGDIYALRARLAEEHDLPLTLVYRDSDAG
FVFALKKTDLSDAGGELPRGFIDVTAQKGRVTFATIELKKRNARMKDALDETLILSDKII
QDLTDDIVVDIGALYKASEAVALLDVLWSFAHASILRNYVRPEFTGTLAIKGGRHPVLES
VQSAGAMVPNDVYCCEASSFQIVQGPNMSGKSTYLKQIALLTVMAMCGCFVPAEYGSFHI
QDALLTRLSNDDDLEKSLSTFANEMASTAMILGLATYDSLVLIDEVGRGTSVREGVAISH
AIAEELIRLKPFVFFATHFSELTTTLSRQPSVVNLHLSVQKSRPTASKFGITFHYKIIDG
APEVFDHYGKASSRSSHYTLAVLILVGLDLARLADLPAPVVTEARRVAELLTEQEERDME
QSRTSKLAVRRKALLRVISRRFPLIRSSLKFSGYSKRRHLGPGTGALALDHSTLPDEELA
AYLARFQKDIMAVLQQTM
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccccactactgcccgtccccagaatgctgcctcatcgcgtggccccgaaggt
agcttcatcattgccgtgctcgagggacgcggcgtcgggagggaggttggaatggcggct
ctcgacaaagacaccggacgtgtcgctttgatccagcttgcggactgtccgacatacgtg
aagacgctgcatcaaatgcatatacacagccccgccatgatccttgttcccgacactttc
ttttctcccaccgatatatcgatgccggctggcggcaataagtctcactcgacttcgttg
ctcgtacagtgcatcacggacgaattcgaaggtgttcccatcgaacccgtcatgcggcgg
tactggaatgagaacgcagggcttgaattcctgaaccagctcaccatagacgacgacgag
cgcgcagctacactcgttgctgtgtccaacaagtattacgccctctccgctgcgagtgcc
ctcttcaagcacaccgagctcaggctcaacacccgatatgtagccaactctctgcttatt
cggtacacccaggtcgaaggcacgatgctgattgactctggcacggcccgtaacttggag
ctggtggggaatatgtccacgcggaaaagtgcacactctttgtttggtctactcaatcat
acgttcacccccatgggtgctcgccttttgcgagtgaatatcttagcacctatcacagtg
aaatcagctctcgaagctcgccttgatgtggtggaggaactcattcagaccgaagatcgt
ttcaacgaagtgaagaacgcgatgaagcctctcagcaagctcgacctggacaagctcatc
agctcgctcgcttcctcagaagtgcgcgaaacaagcagcgcgaaatctgcctccgcgcgc
gtcgctcagatgttgaacttgcggagcatagtacagagcctccctcggcttgccaaggcg
ctcgatggtagccgtgctcaactcttacagatcatcgccgagatgatctcagacgaacga
ttgtacaagattgacgagctcgttagagcaagcttgaacgatgaagccgcacctgcaaag
ggcggtctgaatgcagtgaatgctcgtgtatacgctgtcaaggcaaactacaaccgcctt
ctcgacgtcgcgcgcgagacgtataaggagaacgtcggagacatctacgctctccgtgct
cgtcttgccgaagagcacgacctcccgctcactcttgtctaccgtgattcagatgcgggg
ttcgtcttcgcgctgaagaagacagacctcagtgacgccggcggcgagctaccacggggg
tttatagacgtcaccgcccagaagggacgtgtgacgttcgccaccatcgaactgaaaaaa
cgaaatgcgcgaatgaaggacgcactggacgagacgctcattctcagtgacaagatcatc
caagacctcaccgacgacattgtggtcgatatcggcgccctctacaaagcgtccgaagca
gttgcgctactcgatgtgctgtggtctttcgcacacgcttccatactacgtaactacgtc
cgtcccgagttcaccgggacgctcgcaatcaagggcggcaggcatcccgtgctcgaaagc
gtccagtctgcaggagcaatggttccgaacgacgtatactgctgcgaggcgtcatcgttt
caaatcgtccaaggacccaacatgtccggcaagagcacatacctgaagcaaatcgccctc
ctcacagtcatggcgatgtgcggctgcttcgtgccagcagaatacggttctttccacatt
caagatgcacttctgacgcgcctgtccaacgacgacgatctggagaagagtttgagcacg
ttcgctaacgaaatggcgtctacagcgatgatcctaggtttggccacatacgactcgctc
gtgttaatcgacgaagtcgggcgcggcacgtcagtcagggagggcgtcgccatctcgcat
gccatcgccgaggagctaatcaggctgaagccgttcgtattctttgcaacccatttttct
gaactcaccacaacgctttcacgtcaaccttctgtggtcaatctccatctctcggtccaa
aaatcacgccctaccgcttccaagttcggcataacgttccactacaagatcatcgacggc
gctccagaggtgttcgaccactacggtaaagcatcgtctcgttcatcccactatacgctt
gccgttctcattctcgtaggtctcgacctcgcgagactcgctgatcttcctgcaccggtc
gtcaccgaagcacgccgcgtcgctgagctcctgacagagcaagaagagcgggacatggaa
caaagccggactagcaagctcgcggtgcgccgcaaggcgctcctcagggtaatctctcgt
cgctttcctctcattcgctcatctctgaagttttctggttactctaaacgtcggcatctg
ggtccgggaactggcgcacttgctctcgaccactcgactctcccggacgaggagcttgcg
gcgtacctcgcgcgattccagaaggacatcatggcggtccttcagcaaactatgtga
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