Trametes versicolor: TRAVEDRAFT_45316
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Entry
TRAVEDRAFT_45316 CDS
T04795
Name
(RefSeq) WD40 repeat-like protein
KO
K08266
target of rapamycin complex subunit LST8
Organism
tvs
Trametes versicolor
Pathway
tvs04136
Autophagy - other
tvs04138
Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
TRAVEDRAFT_45316
04136 Autophagy - other
TRAVEDRAFT_45316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvs04131
]
TRAVEDRAFT_45316
Membrane trafficking [BR:
tvs04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
TRAVEDRAFT_45316
mTORC2 complex
TRAVEDRAFT_45316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
Beta-prop_SCAP
Nucleoporin_N
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_2nd
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_NUP159_NUP214
WDR54
Hira
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
Beta-prop_KIB1-4
Mala_s_1-like
Motif
Other DBs
NCBI-GeneID:
19415137
NCBI-ProteinID:
XP_008036238
JGI:
45316
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MSVILVTGSYDHEIRFWEAWSGICSRTIPRVGESGQVNRLAISPDKRLLAAAIHKKAYIY
EIAAAPSAGPIAIFEGHNGNITAVCFHSEGKWLVTGSEDGTIKIWDLRSNSHLHRNYDNE
APVNDVVVHPNQGELISCDQAGRIKQWDLSENICTHELTPGGDTPMRSISLASDGSCLVA
GSGKCYVWKINEERSDLPRFQAVTMFQAHNKYLTRLLLSPDVKFLATCSADTTIKIWSIT
PNYEFKLEKTLQGHQRWVWDCAFSADSAYLVTASSDHTARLWDMSTGETVRQYNGHQKAA
VCCALHDGAG
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcattctcgtcaccggctcgtatgaccatgaaatccgtttctgggaagcctgg
agtggcatatgctcccgcaccatcccccgcgtcggggaatctggacaagtcaaccgccta
gcgatatctccggacaaacgcctactagcggccgccatccacaagaaggcatacatctac
gagattgcggctgcaccctccgcgggaccgattgcgatattcgaaggccacaacggtaac
atcaccgccgtctgcttccacagcgaagggaagtggctggtaacgggaagcgaggatggg
acgatcaagatttgggatctacggagcaacagccatctccaccgtaattacgataatgaa
gcacccgttaacgacgtcgtagtgcacccaaatcaaggggagttgatttcgtgcgaccag
gccgggaggataaagcagtgggatttatcggagaatatctgcacacacgagctgactccc
gggggtgatactccgatgcgctctatcagccttgcctccgatggctcctgcctcgtcgcg
ggaagcgggaaatgctacgtctggaaaatcaacgaggaacgatctgatctgcccagattc
caggccgtgacaatgttccaagcgcacaacaagtacctcactcggctcctcttaagccct
gacgtaaagtttctcgcgacctgttctgccgacacgaccatcaagatctggtcaataacg
cccaactacgaatttaaattggaaaagactttgcaggggcaccaacggtgggtatgggac
tgcgcgttcagtgcggactcggcgtacttggtgaccgcctcctcggaccacactgcgcga
ctatgggacatgtcgaccggagagaccgtacgacaatacaacggacatcagaaggcggcc
gtgtgttgcgcattgcacgatggggctggttag
DBGET
integrated database retrieval system