Trametes versicolor: TRAVEDRAFT_45450
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Entry
TRAVEDRAFT_45450 CDS
T04795
Name
(RefSeq) CDK-activating kinase assembly factor
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
tvs
Trametes versicolor
Pathway
tvs03022
Basal transcription factors
tvs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TRAVEDRAFT_45450
09124 Replication and repair
03420 Nucleotide excision repair
TRAVEDRAFT_45450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvs03021
]
TRAVEDRAFT_45450
03400 DNA repair and recombination proteins [BR:
tvs03400
]
TRAVEDRAFT_45450
Transcription machinery [BR:
tvs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TRAVEDRAFT_45450
DNA repair and recombination proteins [BR:
tvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TRAVEDRAFT_45450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
CCDC47
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
19415159
NCBI-ProteinID:
XP_008036260
JGI:
45450
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MAQRNSWLRGTTIRKSGPSTASTTRNTTPHVVQSTSTTIFGGGVKDPSGRTSEYFSMDDQ
CPVCKSDRYLNPKLRLLVSACYHKMCESCIDRLFTLGPAPCPICAKILRKLAFTPQTFED
LGVEKEVAVRRRIAKEFNKRREDFPDLRSYNDYLEMVEDITFNLINDIDVPETEERIRQY
RRDNAALIELNAKREEEYARYLQEQEEMERQEREQRAQELRRIEEEEREEKEKGRQAIID
KLETSDKDAVRLVAKSRLEAQRRASARASSSAALNLLQSSASLLRSRAAQSTVVPDVPHV
PLQDDWYAYDDMYTMRESYHDPVSDAVRRDRDGIMRAGGYLVEQAWDRALRFAVAGLEIM
PLSGEQPQAPEPMAVDSEGPADVVMATA
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacgaaacagctggctgcgtggcaccacgatccgcaagtcggggccttccacg
gcatccactacgcgtaataccacgcctcatgtcgtacaaagcacgtcgaccacgatattt
ggcggaggggtgaaggacccgtctggccggactagcgagtacttctctatggatgaccaa
tgccctgtgtgcaagtcagaccgatacttgaaccccaagctgcgcttgctggtcagcgcg
tgctatcacaagatgtgcgagtcgtgtatagaccggttgttcacgctaggacctgcgcca
tgtcccatctgcgctaagattcttcgaaaactagccttcacccctcagacgtttgaggat
ctgggcgtcgaaaaagaagtcgccgtccggcgaaggatagcaaaagagttcaacaagcgc
agggaagactttccagacctgcggtcctataacgactatctagaaatggtggaagatatc
acattcaacctgatcaacgacatcgacgtcccagagacagaggagcgaataagacagtac
cggcgagacaacgccgccctcatcgagctcaacgcaaaacgcgaagaagagtacgcccgc
tacctccaagagcaggaggagatggagcggcaggagcgcgagcagcgcgcgcaagagctc
cggcggatcgaagaggaggagcgcgaggagaaggagaagggccggcaggcgatcatcgac
aagctcgagacgagcgacaaggacgcggtgcggctcgtcgcgaagtcccgcctcgaggcg
cagcggcgtgcgtccgcccgcgcatcgtcgtcggccgcgctcaacctgctgcagagcagc
gcgagcctgctgcgctcgcgcgcggcgcagagcacggtcgtgcccgacgtgccgcatgtc
ccgctgcaggacgactggtacgcgtacgatgacatgtacacgatgcgcgagagctatcac
gatccggtgagtgacgcggtccggcgggacagggacgggatcatgcgggctggcgggtac
ttggtggagcaggcctgggaccgggcgttgcggttcgcggtcgccgggctggagatcatg
ccgctctctggtgagcagcctcaggctccagagcccatggctgtcgacagcgaaggacca
gcagatgtggtgatggccaccgcgtaa
DBGET
integrated database retrieval system
