Trametes versicolor: TRAVEDRAFT_51714
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Entry
TRAVEDRAFT_51714 CDS
T04795
Name
(RefSeq) Nucleotidyltransferase
KO
K10981
DNA polymerase IV [EC:
2.7.7.7
]
Organism
tvs
Trametes versicolor
Pathway
tvs03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
TRAVEDRAFT_51714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvs03400
]
TRAVEDRAFT_51714
Enzymes [BR:
tvs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TRAVEDRAFT_51714
DNA repair and recombination proteins [BR:
tvs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
TRAVEDRAFT_51714
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_thumb
DNA_pol_B_palm
HHH_8
DNA_pol_lambd_f
Cdd1
HHH_5
Motif
Other DBs
NCBI-GeneID:
19416651
NCBI-ProteinID:
XP_008042724
JGI:
51714
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MPFKRPAPNPTQSASASGSSSSSGSPPPAKRSKASMTKSLPEIKVYLVQAKLDATAIAEL
LTLGERHTKGVCENAADADVIITAISMRRRFERHVPWDIATSKAVVTPQWLRDSIAHGSA
LPCGEYVAIEDLHETTVKNCPDCNCKPCACADSSASASSPSSSPKRARHLPSPPTSPSVS
RHGTSKQAALIPTHLLPPDPPNVTDLAKLNYKSLYACQRASPLVSPNQDLARELDIIRQS
RALEGEDRSALSYQRAISVIKAYPEKIRSLKQVQKLPYIGVKISGLVDEYLDTGHISEAQ
TIKSSERFRTLSLFTSIYGIGPHAARRLFALGLRSLDDLEIYYGVEPSSSTASPSSQPSQ
IVEIEEKEKTRQAGWKSRDKDRGKGDEEGLGDSWIRVALGLREDLSKMIPRDEVEEIGRV
VMRELDALEPGCVSTIVGGYRRGKPESNDVDIVFTHPDAGKVKGLCKRFVRHLHERGMVT
HVMRTPPPPPLLYPSQARANTKADLSSFHAHDPLRTAHWDTLEKSLTVFVLPASSALNSS
VPVRRRLDLIFAPPEVYWTAVVGWSGSIMFQRDLRQWAKDRCGMKFDSSGITRRYDSKEF
HPKTEKEVFELLGLEWVDPVWRNADL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcccttcaaacgcccagcccccaatccgacgcagtcagcctccgcgtccgggtcttcc
tcgtcttcaggctcaccacctcccgcgaaacgctccaaggcctccatgaccaagtctctg
ccggagataaaggtatatcttgtgcaagcgaaactcgacgcgaccgctatcgccgaactg
ctcaccctgggagaacggcatacgaagggcgtttgtgagaacgcggcggatgcggacgtt
atcatcacggctataagcatgcggcggagatttgagaggcatgttccttgggatattgcg
acgtctaaagcagtggtgacgccccaatggctgcgcgactccatcgcgcacggctccgcc
ctgccttgcggggaatacgtcgccatcgaagacttgcacgagacgaccgtgaagaactgc
ccggactgcaactgcaagccctgcgcgtgcgcggactcctccgcgagcgcgtcatctccg
tcgtcctccccaaaacgcgctaggcatctcccttcccctccgacatctcctagcgtgtcg
cggcacggcacctcgaaacaagccgcacttataccgacgcatctactgcctccagacccg
cctaacgtgaccgacctcgcgaagctcaactacaagtccctctacgcctgtcaacgggcg
tccccactggtaagccccaatcaggacctcgcgcgagaactcgacatcatccggcaaagc
cgcgcgctggagggcgaggatcgcagtgcgttgagctaccagcgcgccatctccgtgatc
aaagcgtacccggagaaaatacggtcactcaagcaggtgcagaagctgccctacatcggt
gtgaagatctccggtctcgtcgacgaatacctcgacaccggtcacatctccgaagcgcaa
acaataaaatcctccgagcgcttccgcacgctctcgctcttcacctccatctacggcatc
ggcccgcacgccgcgcgccgcctcttcgccctcggcctccgctcgctcgatgacctcgag
atctattatggggtcgagccctcctcctccaccgcctccccttcatcccagccatcgcaa
atcgtcgagatagaggagaaggagaaaacgcgccaggcgggatggaagagccgggataag
gacagggggaagggagatgaggagggactgggagatagctggatccgcgtcgcgctcggg
ctgcgggaggatctgagtaagatgatcccgcgggacgaggtcgaggagatcgggcgcgtc
gtgatgcgcgagctcgacgcgctcgagccgggctgcgtctccacgatcgtcggcgggtac
agaaggggaaagccggagagcaacgacgtcgacatcgtgttcacgcaccccgacgccggc
aaggtcaagggcctctgcaagcgcttcgttagacacctgcacgaacgcggaatggtcacc
cacgtcatgcgtacgcctcctccccctcccctcctctatccctcacaagcgcgcgctaac
acgaaagcagacctgtcgagcttccacgcacacgacccgctgcgcaccgcgcactgggac
acgctcgagaagtcgctcaccgtgttcgtcctcccggcttcctccgcgctgaactcgagc
gtgccggtgcgccgccggctggacctcatattcgcgccgccagaggtgtattggacggct
gtcgttggatggagtgggtcgatcatgttccagcgggacttgaggcaatgggcgaaggat
cggtgtgggatgaagtttgatagttcgggaataacacgccggtacgactcgaaagagttc
cacccgaagacggagaaggaggtgtttgagctgctcgggctcgagtgggtcgaccccgtt
tggcggaacgcggacttgtga
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