Trametes versicolor: TRAVEDRAFT_52416
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Entry
TRAVEDRAFT_52416 CDS
T04795
Name
(RefSeq) endo-polygalacturonase PG1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
tvs
Trametes versicolor
Pathway
tvs00040
Pentose and glucuronate interconversions
tvs01100
Metabolic pathways
Module
tvs_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
TRAVEDRAFT_52416
Enzymes [BR:
tvs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
TRAVEDRAFT_52416
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
DUF1565
DUF5666
Motif
Other DBs
NCBI-GeneID:
19416826
NCBI-ProteinID:
XP_008043465
JGI:
52416
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MSAFVRLAALLVFARVALAAPSATDCTGTISSLDDVAAAVKCTTVNINSFTVPAGETFNL
DLATGTTVNMQGDVTFAVKNWDGPLFQVSGKSITFNGNGHTFDGNGPSYWDGQGGNGGVT
KPAPMMKIKISGTYTNVKVLNSPARVYSVSNPAPLTMSQLTIDDSAGDAPNSKSDGKAAG
HNTDGFDCSTTDLTIQDSTIHNQDDCLAINKGSNIVFQRNTCTGGHGISVGSIDSDVTVS
GIVISGNTITNNDQALRIKTKSAATSSTVTNITYSGNTGTGLRQFGVLIDQSYPDTLGTP
GTGVKLSGVNFVGATNSLTVNSDAERVAVNCGSGSCTGTWDWSALKVTGGKAGPITNFSG
IKNFSQ
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccttcgtccgcctcgccgccctcctcgtcttcgcgcgcgtcgcgctcgccgcg
ccgtcggcgaccgactgcacgggcacgatctcgtcgttggacgacgtcgccgccgcggtc
aagtgcacgaccgtgaacatcaactcgttcaccgtgcccgctggggagacgttcaacctc
gacctcgcgacgggcacaaccgtgaacatgcagggcgacgtgaccttcgccgtcaagaac
tgggacggccctctcttccaagtcagcgggaagtcgatcacatttaacggtaacggacat
acgttcgatgggaacggcccatcgtactgggatggccagggtggcaatggcggtgtcacc
aaaccagcgcccatgatgaagatcaaaatatctggtacctacacgaacgtgaaggttctc
aactcgccggctcgggtgtacagtgtatcgaaccccgctccgcttaccatgtcgcagctg
accatcgacgactctgctggagatgctcccaactcgaagagcgacgggaaggcagcgggc
cacaacaccgacggattcgactgcagcaccactgacctgaccatccaggacagcacgatc
cacaaccaggacgactgcttggccatcaacaagggcagcaacatcgttttccagcgcaac
acctgcaccggtggacacggcatctcggttggctcgattgactccgacgtcaccgtctct
ggcattgtcattagcggcaacaccatcaccaacaacgaccaagcactccgcatcaagacc
aagtctgctgcaacgtcctcgaccgtcaccaacatcacctactccgggaacacaggcacc
ggtctccgccagttcggtgtcctcattgaccagagctaccccgacaccctcggcacgccc
ggaaccggcgtcaagctctccggcgtgaacttcgtcggcgcgaccaacagcctcaccgtg
aacagcgacgccgagcgcgtcgccgtcaactgcggctccggctcctgcaccggcacctgg
gactggtctgcgctgaaggtgacgggcggcaaggcgggcccgatcacgaacttctccggg
atcaagaacttctcgcagtga
DBGET
integrated database retrieval system