Trametes versicolor: TRAVEDRAFT_55182
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Entry
TRAVEDRAFT_55182 CDS
T04795
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K10755
replication factor C subunit 2/4
Organism
tvs
Trametes versicolor
Pathway
tvs03030
DNA replication
tvs03410
Base excision repair
tvs03420
Nucleotide excision repair
tvs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TRAVEDRAFT_55182
03410 Base excision repair
TRAVEDRAFT_55182
03420 Nucleotide excision repair
TRAVEDRAFT_55182
03430 Mismatch repair
TRAVEDRAFT_55182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvs03032
]
TRAVEDRAFT_55182
03036 Chromosome and associated proteins [BR:
tvs03036
]
TRAVEDRAFT_55182
03400 DNA repair and recombination proteins [BR:
tvs03400
]
TRAVEDRAFT_55182
DNA replication proteins [BR:
tvs03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
TRAVEDRAFT_55182
DNA Replication Termination Factors
ELG1-RFC complex
TRAVEDRAFT_55182
Chromosome and associated proteins [BR:
tvs03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
TRAVEDRAFT_55182
DNA repair and recombination proteins [BR:
tvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
TRAVEDRAFT_55182
Check point factors
HRAD17(Rad24)-RFC complex
TRAVEDRAFT_55182
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
nSTAND3
AAA_16
RuvB_N
RCF1-5-like_lid
Viral_helicase1
AAA_3
MeaB
Rad17
NTPase_1
Mg_chelatase
AAA_assoc_2
Gp44_lid
AAA_19
DNAX_ATPase_lid
AAA_24
KTI12
AAA_11
SRP54
AAA_30
ABC_tran
RNA_helicase
AAA_18
Motif
Other DBs
NCBI-GeneID:
19417619
NCBI-ProteinID:
XP_008032357
JGI:
55182
LinkDB
All DBs
Position
Unknown
AA seq
345 aa
AA seq
DB search
MSSSTAKGKAPANGNAANLPNYELPWVEKYRPQVLDDVVGNTDTIERLKIIARDGNCPHI
IISGMPGIGKTTSIHCLAHQLLGDGYKEGVLELNASDERGIDVVRNKIKSFAQKKVTLPP
GRHKIVILDEADSMTAGAQQALRRTMEIYANTTRFALACNMSNKIIEPIQSRCAILRYSK
LRDQEVLKRLLEICEMEKVEYSNEGLEALIFTAEGDMRQAINNLQSTWSGFGFVSGDNVF
KVCDQPHPITVQAMIRACLKGDIEGAMDKLDELWDQGYSAVDIVVTVFRVVKTFDEIPEY
TKLEYIKEIGWTHMRILEGVGTLIQLGGLMARLCKMNHKPEHFRV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcatccactgcgaaggggaaggcccccgccaatggcaatgccgcaaacttgcca
aactacgagctcccatgggtcgaaaagtataggccacaagtcctggacgacgtggtcggg
aacacggacactatcgagcggctgaagatcatcgctagggatgggaactgccctcacatc
atcatatctggcatgccgggtattgggaagaccacaagcatccactgcttagcgcaccaa
cttcttggggatgggtacaaagagggtgttttggagctgaatgcgtcagatgaacgaggt
atagacgtcgtgcgcaacaagatcaaatccttcgcacagaagaaggttacgctcccacct
ggacgccacaagattgtcattctggatgaggcggacagcatgaccgcgggagcgcaacaa
gcactgcggcgcaccatggagatctacgcgaacaccacgcgattcgcgttggcgtgcaat
atgtccaacaagatcatcgagcccattcagagtcgctgtgctatcctccggtactctaag
ttgcgggaccaggaggtcttgaagcgcttgcttgagatttgtgagatggaaaaggtggaa
tacagcaacgagggcctcgaagctctcatatttactgccgagggagatatgcgacaagca
atcaataatctccagtcgacgtggtcgggctttggcttcgtctccggggataatgtgttc
aaagtctgcgaccaaccacatccaatcaccgtgcaagccatgatacgcgcctgcctgaaa
ggtgacatcgaaggcgcgatggataagctggacgagctttgggaccaaggatatagtgcg
gtcgacattgtggtcacggtcttcagggtggtcaagacgtttgacgagattccggagtac
acaaaacttgagtacatcaaggagattggctggacgcacatgcgtattttggaaggtgta
gggacattgattcaactcggtggtctcatggcgcgtctctgcaaaatgaaccacaagcca
gaacacttccgtgtataa
DBGET
integrated database retrieval system
