Trametes versicolor: TRAVEDRAFT_56507
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Entry
TRAVEDRAFT_56507 CDS
T04795
Name
(RefSeq) NUC173-domain-containing protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
tvs
Trametes versicolor
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tvs03009
]
TRAVEDRAFT_56507
Ribosome biogenesis [BR:
tvs03009
]
Eukaryotic type
90S particles
Other 90S particles
TRAVEDRAFT_56507
Pre-60S particles
Other pre-60S particles
TRAVEDRAFT_56507
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT
IFRD
Motif
Other DBs
NCBI-GeneID:
19417769
NCBI-ProteinID:
XP_008034021
JGI:
56507
LinkDB
All DBs
Position
Unknown
AA seq
1254 aa
AA seq
DB search
MADNVEAVLSKIRPHTSSALAHQKAPATLLRAIEATFREQNTEPSATAYFATLLTTLDGA
LQSSGASGPAMGEADVVPAVLYLLAAVVPCVPHPVIRSNLPTTLSLTSPLFSALSTFAPP
LRSQITLYGAVLHALDRSDLDVQGLRQAFMTILQFTLDPRPKVRKKAAEVVKDVLSAPPL
PMAKHPYAEKVAEWVKAALTEISSGGIPKFKGKKADTEGSEAAVHLLAFLRPVLPTLPTE
SLSSITSSLLLLPRLGNPYLSQSAYSILSDLLTLSLDDPTVDLASHMSELLKVILSSPPI
KSDVALNAAWATVLGNTMLAYHHANADECVLQVNKVWKALWNLLESSEAATRKAAGQALA
NLGKCFTPATIKAAVKEKDSDEPKNPIRKIIFQTSAALDSLTYARAIPDVLSVVSSLIEN
LRFRNGSRKNSTAAEQLMLPLITKIADLRVQKTFEHKEAADATLGTAVRIMGPEVVLRAL
PLNLETVDRQAGREPRAYLLPLLAQPHSSPLGHFVNYFVPLTERMFDLQTTAEAEGRQSE
AKVWSVLVEQIWMGLPGYCWGTVDLKQSLTAQFSQLLSQLLYGQPTLRPPVLRALKIMVD
SNVALASGDAAKIAKLPQHVRVDPISEADAEANIAFLRTQAESWLAVLFNVFGSVGRDNQ
AMVGDVVGAWIAIADPKEVTQAYHKLVTLFDQNLSRAKNISAPSANKGPSADSMTVVTQD
LLLLILPYLSSEDATALLNLYLTTEVLESRDNGVQKRGYKTLARLVESGKTQLDAAAVFK
TLESLVDGLAAAAKKDRFHLLTAVVRLIPSESLHLIPSVIPEAVLGTKEPSEKARNAAFD
LIVAMGKKMSAGGVVKRDQVEGMEEDDAPVDATANIEEYMTMIAGGLAGASPHMISATVT
AISRLVFEFRESISSAMQTEIFVTILVLVGSANREIVKSALGFVKLAIHTLPAELLRPHL
KDIVPTLLRWSHDHKNHFKAKVRHIFERLLRRFGWEDVYACAQEEEARGVLVNIKKRKDR
AKRKRANAPQEDDDVPKAKAIAGDAFEDVLYGSESELDDSDDEDAPAQNAAPKRKGKDAG
ARLRIDNDEPMDLLSGAASGVTTANAGKRRKPGQDAARFKDDDAGKMVIDDGSDEEAAAG
ADVVAGDAYRESLTSVDGFTRGPNGKVKFNKDTKKRRREADEAEDVEMADAEAGQKAGKK
SKKRTDPKFGHEFKAKKAGGDVKKNGVDPYAYMPLSQAAKKQNRGSRVGIAGKR
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaacgtcgaggctgttctcagcaaaatccgccctcacacctcgtctgctctc
gctcaccaaaaggctcccgctactctccttcgggcgatcgaggccactttccgcgaacaa
aatactgagccttctgcgaccgcctactttgccactctcctcaccactctcgatggtgcg
cttcaatcctctggcgcatcagggcccgctatgggcgaggcggacgtcgttcccgccgtg
ctctacctcctggctgcagtggttccgtgcgttccccatccggtcatccgctcaaatctc
cctaccaccctctcgttgacttcaccgctcttctctgccctatcaacgtttgcgcctcct
ctgcgctctcaaatcacgctctacggtgctgttctccatgctctcgatcggtcggactta
gatgttcagggtctccggcaggccttcatgactattcttcagttcactcttgatcctcga
ccaaaggtgaggaagaaggctgcagaagtagtgaaggatgttctctccgcacctcccctc
ccaatggccaagcacccgtacgcggagaaggtcgcggaatgggtcaaagctgccctcact
gaaatcagttccggagggatccccaaattcaagggcaagaaggcggatacggagggctct
gaagccgctgtccatctactcgctttcctgcgacccgtgctcccaaccttgcctacggag
tctctatcgtcgatcacgtcgtcgttgctccttctccctcgtctggggaacccatacctg
tcccaatcagcgtattccattctctctgacctcctcactctctcgctggatgatcccacc
gtcgatctcgcctctcacatgtccgaactcttgaaggttatcctttctagtccgccgatc
aagagcgacgtcgctctcaatgccgcctgggcgactgttctcgggaataccatgcttgct
taccaccacgccaatgccgacgagtgcgtcttgcaggtaaacaaggtgtggaaggcgctg
tggaacctcctcgagtcctccgaggccgcaacccggaaggccgccggacaagctctggca
aacttgggcaagtgcttcacgcccgctaccatcaaggctgcggtgaaggagaaagactcg
gatgagccgaagaacccgatccggaagatcatcttccagacctcggcggcgctcgactct
ctgacctatgctcgtgcgataccggatgtcttgtcggtggtatcttccctcattgagaac
ctacgcttccggaatggctctaggaaaaacagcacagccgcggagcagctcatgctcccc
ctgatcacgaagatcgccgacttgagggtacagaagacgttcgagcacaaggaagctgct
gatgcgacgctgggtaccgctgtgcggataatgggccccgaagttgtcctccgcgctcta
ccactgaacctggagactgtagacaggcaggccggccgtgaaccacgagcatatcttctg
cctttgcttgcgcagcctcactcctcaccactggggcattttgtgaactacttcgtaccc
ttgaccgagcgcatgttcgacctgcagacaacggcggaagccgagggtcgtcagtcggag
gcgaaggtctggagtgtgctcgtggagcagatctggatgggattgcctgggtactgctgg
ggaactgtcgacctcaaacagtctcttactgcccagttctctcagctcctctcacagctg
ctctatggccagcctaccctccgtcctccggtactacgtgcactcaagatcatggttgat
tccaatgtagcactcgcaagcggagacgctgcgaagatcgcaaagcttccccaacacgtt
cgcgttgacccgatctctgaggcggatgcggaggcgaacatcgctttcttgcggacgcag
gcggaaagctggcttgccgtgctcttcaacgtgttcggtagtgttgggagagacaaccag
gcaatggtcggagatgttgtcggtgcgtggatcgcgatcgcggatccgaaggaagttacg
caggcgtatcacaagctggtcaccctctttgaccagaacctgtccagggcgaagaatatc
tcggcgccctcggcgaacaagggtccgtcggcggactcgatgaccgtcgtcacacaggac
ctgctgctgctcatcctcccctacctgtcctccgaggacgcgactgcactgctcaacttg
tacctcaccaccgaggttctcgaaagccgagacaatggcgtgcagaagcgtggctacaag
accctcgcacggctcgtggagagtggaaagactcagttggacgccgcggcggtgttcaag
acgctcgagagcttggtggacggcctcgccgcggccgcaaagaaggacaggttccatctc
ctgactgcggtcgtgcggctcatcccgtccgagtcgctgcatcttattccctccgtcatt
cctgaggccgtcctgggcacgaaggagccgtcggagaaggcgcggaacgctgcctttgac
ctgatcgtggcgatgggcaagaagatgtctgccggaggtgtagtgaagcgtgaccaggtt
gaggggatggaggaagatgacgcacctgtagatgcgaccgcgaacatcgaggagtacatg
acgatgattgcaggtggtttggccggtgcctcgccgcacatgatcagcgctacggtgacc
gctatctcccgccttgtcttcgagttcagagaatcgatctcgtcggcgatgcagacggag
atcttcgtcaccatcctcgtcctcgtcggctccgcgaaccgcgagatcgtcaagtccgcg
cttgggttcgtcaagctcgccattcacacgctgcctgccgagctcttgcgaccgcacctg
aaggacatcgtgcccacgctcctgcggtggtcccacgaccacaagaaccacttcaaggcg
aaggtacggcatattttcgaacgcctgctcaggcgcttcggatgggaggacgtgtacgcg
tgtgcgcaggaggaggaggcgcggggcgtgcttgtgaatatcaagaagcgcaaggacagg
gcgaagcggaagcgcgcgaatgcgccccaagaggacgacgacgtgccgaaggcgaaggcc
atcgcaggcgatgcgttcgaggacgtcttgtatggaagcgagagcgagcttgacgatagc
gacgacgaggatgcgcccgcgcagaatgccgcgcccaagcggaagggcaaggacgccggc
gcccggctccgcatcgacaacgacgagccgatggaccttctttccggagcggcctcaggc
gtcaccactgcgaacgctgggaagcggagaaagcctggacaggacgccgcccgcttcaag
gacgacgatgcaggcaagatggtcatcgacgacggctccgacgaggaggctgctgcgggt
gcagacgttgtcgcgggcgatgcctaccgcgagagcctaacttccgtggacggcttcacg
cggggacccaacgggaaggtaaagttcaacaaggacacgaagaagcgacggcgcgaggcg
gacgaggcggaggatgtcgagatggcagacgcggaggctggccagaaggcgggtaagaag
agcaagaagaggacagaccccaagtttggacatgagttcaaggcgaagaaagcaggaggg
gacgtcaaaaagaacggcgtggatccatacgcgtacatgccgctttcgcaggctgcgaag
aaacaaaatcggggctcccgggtcggtatcgccggcaagcggtaa
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