Trametes versicolor: TRAVEDRAFT_56872
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Entry
TRAVEDRAFT_56872 CDS
T04795
Name
(RefSeq) polymerase
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
tvs
Trametes versicolor
Pathway
tvs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TRAVEDRAFT_56872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvs03019
]
TRAVEDRAFT_56872
Enzymes [BR:
tvs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
TRAVEDRAFT_56872
Messenger RNA biogenesis [BR:
tvs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
TRAVEDRAFT_56872
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Peptidase_S49
Motif
Other DBs
NCBI-GeneID:
19417801
NCBI-ProteinID:
XP_008035174
JGI:
56872
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MASGTGYLGVTPPISTNESSIREKEVTTTLMGELQRQGIFESEEEAKTREIVLGRLAALI
KKFVRQVSLSRGLSEAAANAAGGKIYTFGSYRLGVHGPGADIDTLCVAPRHVTRDDFFNV
LEGMLREMEGVTEVSGVPEAYVPIISTEISGIPIDLLFAQLDLPIIPEDLDLQDDNLLRN
LDEKSIRSLNGSRVINEILRLVPNVDVFRTALRCIKLWAQKRAVYSNVNGFLGGVAWAML
VARVCQLYPNAVAGAIVSRFFVIMHKWSWPQPVLLKPIEDGPLQVRVWNPKVYSQDRSHR
MPIITPAYPSMCATHNVMQSTQQIMKEEFQRGCAIVDDVMLGKAEWSALFVKHDFFQRYR
FYLQVVAASRDLEMQNKWSGTVASKIRQLVMRLEYVDALKLAHPFIKGFDVVYYCLSEEE
AQVVTRGEIPPAVAQRKKEDVADKEGVITVHTTSFFIGLSIKPKEAGSTGPRRLDISYPT
TEFVKMTKMWEKYDESAMHIAVRHIKHTVLPDFVFEPGEREAASRPTKRSRSIKDSPAPA
TKRSRTDLGVDMQSRPTSSASSTRLPASSSQVLQTNSADAGSNMLDDLPHTSATSQTPDP
LTVAASA
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaggaactggatatctcggcgtgacaccgcccatctctaccaatgaatcgagc
atccgggagaaggaagtgacgactaccctcatgggtgagctccaacgccaaggaatcttt
gagagtgaggaggaagcgaagacgagggagatcgtactcggtcgtctagctgctttgatc
aagaagtttgtacgacaagtatccttatcccgcggtctttcagaggcagcagcaaacgcc
gcaggaggcaaaatctacaccttcggttcatacaggctcggcgtacacggcccgggcgct
gacatagatactctttgtgtcgctccgcgacatgtcactcgggacgacttcttcaatgta
ttagagggaatgttgcgcgagatggagggcgtaacggaagtctcgggcgtccccgaggca
tatgtacccattatttcgacagagatttctggtatccctatcgatctgctattcgctcag
cttgatctgcctataattcctgaggacctggaccttcaagacgacaaccttttgagaaac
ctcgacgagaagtcgatccgcagtctcaacggttctcgcgtgatcaacgagattctgcgg
cttgttcccaacgtcgacgtcttccggacggcgttgcgatgcatcaagctgtgggcgcag
aaacgagccgtgtactccaatgtcaacggctttctcggtggcgtcgcctgggcaatgctc
gttgcccgtgtctgccagctgtatcctaatgccgttgctggtgctatcgtcagccggttc
ttcgtcatcatgcataagtggtcgtggccgcagcctgtactcctcaaacctatcgaagac
ggcccactgcaagtgcgcgtatggaatcccaaggtgtattcccaggacagatctcaccgg
atgcctatcatcacgccggcttacccatctatgtgtgccacccacaatgtaatgcaatct
acgcagcaaatcatgaaggaggaattccagagaggttgcgccatcgtggatgatgtcatg
ctcgggaaagcagaatggtccgcgctctttgtgaagcatgacttcttccagagatatcgg
ttctatcttcaagtcgttgcggcgtcgcgtgatcttgaaatgcagaacaaatggtccggc
acagtggcgtctaagattcggcagttggtaatgaggcttgagtacgtcgacgccctgaag
ttggcgcaccctttcatcaagggattcgatgtcgtctactactgcctctccgaggaggaa
gcgcaggtcgtaacccgtggtgaaattcctccagccgttgcgcagcgcaagaaggaagac
gtggccgacaaggagggtgtaatcaccgtgcacaccacatcattcttcattggcctgtcc
atcaagcccaaggaagcgggttcgacgggccctcgcagactcgacatctcgtatccgaca
acggagttcgtcaagatgactaagatgtgggagaagtacgacgaatctgcaatgcacata
gcggttcggcacatcaagcacacggtgctccccgacttcgtgttcgagcctggtgagcgg
gaggcggcgtcccgtccaaccaaacgcagccggagtatcaaggactcgccggccccggct
acgaagaggtcgagaacggacctcggagtcgatatgcaatctcgtccaacctcttcggcg
tcgtctacacgcctcccagcgtcttcatctcaggtgctacagaccaattccgcagacgca
ggttccaacatgttagacgatttgccccacacgtctgcgacctcgcaaacgccagatccc
ttgaccgtcgccgcaagcgcgtga
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