Trametes versicolor: TRAVEDRAFT_57102
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Entry
TRAVEDRAFT_57102 CDS
T04795
Name
(RefSeq) uncharacterized protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
tvs
Trametes versicolor
Pathway
tvs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TRAVEDRAFT_57102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvs03400
]
TRAVEDRAFT_57102
DNA repair and recombination proteins [BR:
tvs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
TRAVEDRAFT_57102
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ZGRF1-like_N
HDA2-3
Motif
Other DBs
NCBI-GeneID:
19417826
NCBI-ProteinID:
XP_008035199
JGI:
57102
LinkDB
All DBs
Position
Unknown
AA seq
1083 aa
AA seq
DB search
MPAFQNPDTGASLKRKPEQHDPNFASRKRQATENDSASGTSAMEGEHYFMVQWRNPQYKK
HKTWDGDAVLVVSGNKCTLYDTDNKQIGSGKPHGVEGAHKLGEGSEFSIGSREVEIDHRL
SREDFLSGRCFGRGGIPEVSATSARPSAAKQFVPLKPKTLNGKNPAYIVPVVAEKEKRGV
VLEAVNLVSAQKTSTKGRTKESSWTANCRRKPQQKKHKTWDEDGYVLHEGEKLTLLSDTG
VVLGSKKWDGLPLYSGYNCFIGSREVELDSEISRSRLPTIVGSSKEPPVDPDFGETSSSQ
TGSSFLVEARRTSQEGANSSSPSVNSPASAKKFIPPSSFYGATTKPKPKGPLHSPDAPGA
VVMKAPSREHQAKFNKKNLPVVPVVIDPVIARHLRPHQREGVQFLYECVMGLRKHEGQGS
ILADEMGMGKTLQTIALVWTLLKQNPYAGAGPVVGKVLIVCPVSLINNWKNEFHKWLGKD
RVGVFVGDKNKSTIKQFLNSRIHQVLVIGYERLRTVIDDLAYCNPPIGLIVCDEGHRLKS
ANNKTSTMFEALRTPRRVILSGTPIQNELSEFHAMADFCNPGLLDDYSTFKRVYETPILK
SRAPGCSSKEAELGEARSAQLTAIAKSFVLRREATMLKKYLPAKHEYVVFITPTKLQLAI
FEKILSSDKLDNLVRSSTAESLALINMLTKISNSPILLKATADQARLKAQQGGDVVKRNA
IEDALKLLPSGAQIEDVALSGKLSALATLLRALHKHTEEKCIIVSHYTSTLNIIEAYCKK
KSYTYHRLDGSTPAAKRQDYVNDFNRSSQAKRFVFLLSSKAGGVGLNLIGASRLCLIDSD
WNPSHDLQSMARIHRDGQKRPVYIYRFLTTGSIDEKIYQRQVTKLGLSDLSQGSSESKSD
SFTRKDLLDIFTINPHTACNTHDLLDCPCEASDEAEPKPITREEMDEASSSSDEDEDPVK
GFMAASQVTTKDVNKMDKAYMKQKRAQLAALGEWTHINCLRPGAAEKVQDDMLTHLIYSL
PKPASTSSAPQTITEKLLDAVDRIADEEAFFQRDKIPGGSVSFLFERSSKLTLQEREAVD
EDD
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcttttcagaacccagatactggcgcgtcattaaaacgcaagcctgagcaacat
gaccccaacttcgccagtcgtaagagacaagcaacggagaacgacagcgcgtccggcacc
tccgcgatggagggtgagcattacttcatggtccaatggaggaatcctcaatacaagaaa
cacaagacctgggatggagacgcggtgctagtcgtcagcgggaacaagtgcacactgtat
gataccgataacaaacaaatagggagcggtaagcctcacggagtcgaaggggcgcacaaa
cttggggagggctcggaattctccatcggcagtcgggaggtcgagatcgaccacagactg
tcgcgcgaagacttcttatctggcagatgctttgggaggggtggtattcctgaagtctct
gctacgtcagcgcggccaagtgctgcgaaacaattcgttcctctcaaaccgaagactcta
aacggcaagaaccccgcatacatcgtgcctgttgtggcggagaaggagaagcggggcgtt
gtcctagaggcggttaatttggtttcagcacagaagacttcaacgaagggtcgcacgaag
gagtcatcctggacggcgaattgcaggcgcaaaccccaacagaagaagcataagacgtgg
gatgaagatggctacgtgctccatgaaggagagaagctgactttgctatcggataccggt
gtagtactgggctcgaagaaatgggacggcctacccctctacagcggttacaattgcttc
attggcagtagggaagtcgagctcgacagcgaaatttctcgttcgcgactgcctaccatc
gtgggctcgtccaaggaaccgcctgttgatccagactttggcgaaacttcaagttctcag
acggggtcgtctttcctagtcgaagcacgaaggacatcgcaagagggtgccaatagctca
agtccgtctgtgaactcccccgcatcagcgaagaagttcataccgccatcctccttctat
ggagcgaccaccaaaccgaaaccgaaagggcccttacatagccctgacgctccaggggcg
gtcgtgatgaaggcgcctagcagggagcatcaagcgaagttcaacaagaagaatctacca
gttgttccggtagttatcgaccctgtgatagctcgccaccttcgccctcatcagagagaa
ggtgtacaattcttatacgaatgcgttatgggtctacgcaagcacgaaggccaaggatct
atcttggctgacgagatggggatggggaagacgttgcagaccatcgcgcttgtctggaca
ttactcaagcagaacccgtacgctggtgcggggcctgttgtcgggaaagtactcatcgtc
tgcccggtttccctcatcaataattggaagaacgaattccacaagtggttgggtaaggac
cgggttggagttttcgttggcgacaagaacaagtctaccatcaagcagtttcttaactcg
aggatacaccaagtactcgtgattggatacgaacgtctccgcactgttattgacgaccta
gcatattgcaacccgcccatcggcctcattgtttgcgacgaggggcataggctgaagtct
gcaaataacaagacgtccacgatgtttgaggccctccggactccccgccgcgtcattcta
tcaggaacgcccattcagaatgagctgagcgaattccatgcaatggccgacttctgcaac
ccaggattacttgacgattacagcaccttcaagcgggtctacgagacaccaattctcaag
agccgcgctccaggttgtagttcgaaggaagctgagcttggagaagcacgctctgcacag
ctcacagccatcgcgaagagtttcgttctgcgcagagaggccacgatgctgaagaagtac
ttgccggcgaaacacgaatacgttgttttcatcacgccgacgaagctacaattggctata
ttcgagaagatcctctccagcgacaagcttgacaatcttgtccgcagctccaccgcagag
tcgcttgctctcatcaatatgctcacgaagatcagcaatagccccatcctgcttaaggcg
accgccgatcaagcgaggctcaaagcacagcaaggtggcgatgtagtgaaacgcaatgcg
atagaagacgcactcaagctgctgccctcgggggcgcagattgaagatgttgctctgagc
ggtaaactgagtgctcttgctactctgcttcgggcgctgcacaagcatactgaggagaag
tgcatcatcgtctctcactacacttccaccttgaacatcatcgaggcgtactgcaagaag
aagtcgtacacataccaccgcttggatgggagcacccccgcggccaagcgtcaggactat
gtcaacgacttcaacaggtcctctcaggcaaaacgattcgtgtttctgttgagctccaag
gcaggaggtgtcgggctcaatctcattggtgcatctcgtctatgcctcattgactcagat
tggaaccccagtcatgacctgcagtcaatggctcgcatacatcgtgacggccagaaacga
cccgtgtacatctatcgtttcctcacgaccggtagcatcgacgagaaaatctaccagcgg
caagtcactaagttgggcctgagtgacttatctcagggttcctccgagtcgaagtccgat
tcattcacccgcaaagatctcttggacatcttcaccatcaatccccatacggcgtgcaat
acgcacgaccttctggactgcccttgtgaagcatcagacgaagcagaacctaagccgatc
acgagggaggagatggatgaggcaagctcttctagcgatgaagacgaagacccagtcaag
ggcttcatggccgcctcgcaagtgacgacaaaagacgttaacaagatggacaaagcatac
atgaagcagaagcgtgcacagctcgccgcgcttggggagtggacgcacatcaactgcctc
cggcctggcgctgcagagaaggtccaggacgacatgctcacgcatctcatctactctcta
cccaaacctgcgagcacgtcatccgccccgcagacgataacggagaagctcctagacgct
gtggacaggatcgccgatgaggaggcgttcttccagcgggacaagatccctggggggtcg
gtgtcgttcttgttcgagcgcagctcaaagttgaccttgcaggaacgcgaggcggtggat
gaggacgactga
DBGET
integrated database retrieval system
