Trametes versicolor: TRAVEDRAFT_57273
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Entry
TRAVEDRAFT_57273 CDS
T04795
Name
(RefSeq) cap binding protein 80-PB
KO
K12882
nuclear cap-binding protein subunit 1
Organism
tvs
Trametes versicolor
Pathway
tvs03013
Nucleocytoplasmic transport
tvs03015
mRNA surveillance pathway
tvs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRAVEDRAFT_57273
09122 Translation
03013 Nucleocytoplasmic transport
TRAVEDRAFT_57273
03015 mRNA surveillance pathway
TRAVEDRAFT_57273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvs03019
]
TRAVEDRAFT_57273
03041 Spliceosome [BR:
tvs03041
]
TRAVEDRAFT_57273
Messenger RNA biogenesis [BR:
tvs03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
TRAVEDRAFT_57273
Spliceosome [BR:
tvs03041
]
Common components
Common spliceosomal components
Cap binding complex
TRAVEDRAFT_57273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Uricase
Motif
Other DBs
NCBI-GeneID:
19417843
NCBI-ProteinID:
XP_008035216
JGI:
57273
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MSHHRRRPHPREDYGRDTYETPDQKLRKNIIHFGEVDPEQEIPRLATQIFDHTPANVPAV
TEGFRIGVTEQPFKIPYYAALMRLLHDRPVADAAPGSPSLGKQVLDDFWKGFQAFLDKQA
WRETRLCVQFFAHLTVARVISVQSMYELLKSFTAVLDEFGVSHGRAAKAGLCAAEGLMIS
GPVVKQDASLDTTEIITALQTYIESTNDAKTLVQPAIQLFTDTPVLEHAEEWLDCALAAL
KTLNGSDFAQTADSYPQPYMVSPPWTEEPFNLPGVLVPPEVIELDGLTTESGEDAQPKKE
EWPQGYVRLFENDVTPDPTTPVGFAIRSTLLDIVDIFEVNRKDCARLLLEFPKWTPPGTF
KPRPGAPPQSPKEGKDWQLESTILETILGATFMLPESTYKSIYYIALITELCKSSPTTVG
PAVGKSIRRLYALLADGLDVEVSHRFAEWFAVHMSNFGFQWVWKEWIPDLTLVSQHPKRT
FMRRAVEFEIRLSYHDRIMRILPEPMREADAHVISVEAPGPDYIYDDPTNPHHESAQALL
TLIRGRAKPDDVMAHLETLRNSLMETTAQDANTIVRSLTVQSLLHIGSRSFSHFLNAIER
YLPLLRNLAAGQISSGGNASAEARTDIMNTVAAFWKNSRHMILIVFDKLMQYQIVDPTDV
VAWTFTHWAAVLEGTPKATFNAFQWDLLKAALDKANGRVMVQRRKVAVLRKEADDNAAKA
IAGESAAMEVDAEARPDVIPVGESPQLTSAIKAFTVLTREQKSALARTLDGFVDCLAVET
ASEKVREVITEHAWHNRANWEDDDWEIWETWGWYRHWGRTYSPYLRNYMNTIGTVAFAKV
PSKADPAVELFRKTWNIATGQEV
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagccatcacaggcgcaggccgcaccctcgagaggactatggacgcgacacgtatgaa
acgccagaccaaaagttgaggaagaacatcatacacttcggcgaagtggatcctgagcag
gaaatacctcgtctggctacccaaatctttgaccacacacctgctaacgttcccgccgtt
accgagggcttccggataggtgtcacggagcagccattcaaaatcccctattatgctgca
ttaatgcgtcttctacacgatcgtccagttgccgacgctgctcctgggagcccgtccctt
ggcaagcaagtgctcgatgacttctggaaaggcttccaggctttcctggacaagcaggca
tggagggaaacgcggctatgtgttcaattcttcgcgcacttaactgtggcgcgagtgata
tccgtgcagtctatgtatgagctcctgaagtcattcacggcggtgttggatgagttcggt
gtgtctcatgggcgtgctgcgaaggcaggactctgcgctgcagaagggctgatgatttca
ggacctgtggttaagcaagatgcttcattagacaccacagaaatcatcaccgcgctgcag
acttacatcgagtcaaccaatgatgcgaagacattggtgcagcccgcaatacagctcttc
actgacactcctgttttggagcatgcggaagagtggcttgattgtgcgcttgcagccttg
aaaacgctcaatggctctgattttgcgcagaccgcggatagctacccacaaccgtatatg
gtgtcaccaccttggactgaggaacccttcaacttgcctggagttctggtgccgccagag
gtcatcgagcttgacgggcttacgacagagtcgggcgaagatgcgcagcccaaaaaagag
gaatggccacaaggctacgtccgtctctttgagaacgacgtcactccggaccccacgacg
cctgtcggctttgccatccgttcaaccctgctcgacatagtcgatatattcgaggtcaac
cgcaaggattgtgcgcgcctccttctggagttcccaaagtggactccaccaggtaccttc
aagccccggcccggtgcgccaccacagtccccgaaagagggcaaagactggcagcttgag
agcactatcctcgaaactattctcggcgctacattcatgctccctgaatcgacatacaaa
tctatctactacatagctctgatcaccgaactgtgcaagtcctctcctactactgttggc
ccagccgttggcaagtccatccgccggctatatgcgctacttgccgacggtttggatgtg
gaagtatcccatcggtttgccgaatggtttgctgtccacatgagtaacttcggattccaa
tgggtatggaaagaatggatccccgacttgacactcgtctcccaacatccgaagaggacg
ttcatgcgccgtgccgttgagttcgaaatccgactctcctaccatgaccgtatcatgcgc
atactccccgagccgatgagggaggcggacgcccatgttatatctgttgaggccccaggt
cctgactacatttacgacgaccctaccaacccacaccacgagtctgcccaggcgctcctc
actctcatccgcggccgcgcgaagcccgacgatgtcatggcgcacctcgagacgctccgc
aacagcctgatggagacgacagcacaagatgcgaacaccatcgtgcgctcgctcaccgtg
cagtcgctgctgcacatcggctcgcgctcgttctcgcacttcctcaacgcgatcgagcgc
tacctcccgcttctccgcaacctcgccgcgggccagatctcgtccgggggcaacgcgagc
gcggaggcgcgcacggacatcatgaacaccgtcgccgcgttctggaagaacagccggcac
atgatcctcatcgtgttcgacaagctcatgcagtaccagatcgtcgacccgacggacgtc
gtcgcgtggacgttcacgcattgggcggctgtcctcgagggcacgcccaaggcgacgttc
aatgcgttccagtgggacttgttgaaggcggcgctggacaaggcgaacggtcgtgtgatg
gtgcagaggcgcaaggtggcggtgctgaggaaggaggctgacgacaatgctgcgaaggcc
attgctggcgagagcgcagcgatggaggttgatgcggaagcgaggccagacgttattcct
gtgggagagtctcctcagctcacgtctgcgatcaaggcgttcacggtcctcactcgtgag
cagaagtctgctctcgctcggacgctcgacggcttcgtcgactgtctcgccgtcgagacc
gccagcgagaaggtgcgcgaggtcatcactgagcacgcctggcacaaccgcgcgaactgg
gaggacgacgactgggagatctgggaaacctggggctggtaccgccactggggccggacg
tactccccgtacctgcgcaactacatgaacaccatcggcacggtcgcgttcgcaaaggtt
ccgagcaaggcggacccggcggtggaactgttccggaagacatggaacatcgccacgggc
caggaggtgtga
DBGET
integrated database retrieval system
