Trametes versicolor: TRAVEDRAFT_57640
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Entry
TRAVEDRAFT_57640 CDS
T04795
Name
(RefSeq) pseudouridylate synthase 4
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tvs
Trametes versicolor
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tvs03016
]
TRAVEDRAFT_57640
Enzymes [BR:
tvs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TRAVEDRAFT_57640
Transfer RNA biogenesis [BR:
tvs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TRAVEDRAFT_57640
Prokaryotic type
TRAVEDRAFT_57640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
19417884
NCBI-ProteinID:
XP_008036461
JGI:
57640
LinkDB
All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MPKDAESGPVSALFGVIKPSGPTSMSVVNDVKKLVASSPLFVEKSKLAEKSKQSGKKNRF
RRDAVKIGQGGTLDPLADGVLVIGVGKGTKKLSEFLDCVKEYRTTCLLGCETDTYDSEGK
QVRAAPWHHVTREQVEQALEQFRGEIEQVPPIFSALKMDGMALYDYARKGIPLPRPIEKR
KVTVHELELVEWLGSDHTFKHPEKKFSKEEQEAMEAALKGVDGGASIKDEPEQEEPSEKP
PTAFVLRMKVSGGTYVRCIVHDLAHALGSAGHVVTLQRSRQGRFALQPKEEGDRACVPWE
VFQAALADEGAVDDEGHKEWEREVLSKLEVV
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggatgcagaaagtggcccggtatcggcgctcttcggtgtgatcaaaccgtct
gggcctacatccatgtccgtagtgaacgacgtcaagaagctcgtcgcgtcctcgcctctc
ttcgtcgagaagagcaagctcgccgagaaatcgaagcagtcgggcaagaagaacaggttc
cggcgcgatgcagtcaaaatcgggcagggcgggacgctcgacccgctcgcagacggcgtc
ctcgtgatcggcgtcggcaaaggtacgaaaaagctctctgaatttctcgactgcgtcaag
gagtatcgcacgacgtgcctgctagggtgcgagaccgacacgtacgatagcgaggggaag
caggtgcgcgccgcaccgtggcaccatgtcacgcgggagcaggtcgagcaggccctggag
cagttcagaggcgagatagagcaggtaccaccaatcttctccgcgctaaaaatggacggg
atggcgctgtacgactacgctcgcaagggtatccccctgccgcgcccaatcgagaagcgg
aaggtgacggttcatgagctcgagctggtcgaatggctgggcagcgatcacaccttcaaa
caccctgagaagaagttctctaaggaggagcaagaagcgatggaggccgccctgaaaggc
gtcgacggcggtgcttccatcaaggacgagccggagcaggaggagccctcagaaaagcca
ccgacggcattcgtgttgcggatgaaggtttccggaggcacttacgtccggtgcatcgtg
cacgacctcgcacacgccctgggatctgccggccatgtcgtcactcttcagcgatccagg
caaggccggtttgcgctccagccgaaggaggaaggcgacagagcatgcgtaccatgggaa
gtcttccaagcggcactagccgacgaaggtgctgtagacgacgaaggtcataaggaatgg
gagcgagaggtgctgtcaaaattagaggtcgtatag
DBGET
integrated database retrieval system
