Trametes versicolor: TRAVEDRAFT_57912
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Entry
TRAVEDRAFT_57912 CDS
T04795
Name
(RefSeq) SNF2 chromatin remodeling protein
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
tvs
Trametes versicolor
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvs03021
]
TRAVEDRAFT_57912
Transcription machinery [BR:
tvs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
TRAVEDRAFT_57912
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EZ
HEAT_EF3_N
UTP20
TOR1L1_N
mTOR_dom
CLASP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
19417913
NCBI-ProteinID:
XP_008036490
JGI:
57912
LinkDB
All DBs
Position
Unknown
AA seq
1947 aa
AA seq
DB search
MTSRLDRLLLLLDTGSSASVRTTAAKQLAQLAAKSVISDVAIVEDDVKTNRHHAAVGDPS
GWSELMAVLARILPYLHSRSHETRTAASTALSQIFSLVPLWTPGPGAEAKPYGASLTLPA
PEFPSFSVRELMEKGTLLLASSGKEFIKPTGILANSNEVKKARREAMGRLGLDFLESVGG
ADDMDLDKELAAEDADPDVEMAPPTSPAVKSEDESVPISPIEEPVDVKVKKEEAMAGRSK
SSTPAAPSLTTTPAPEDMSALSARERNRLKRKRKPGNAAVVAAPPPSQGANAKFQAASAG
PAKARLVVNGDKSAPKRTDSPKSPTDGPAPDRVVVDPSKGGAVAPKTESKSKALEVQPGC
WVWDGLVKLLEVDLFSAAWEVRHGAAMALRELLKVQGKYGGMRAGDIEWDENLVAHEKWC
NDLAVRFLCIFVLDRFGDFVSDQVVAPVRETVSQTLASLLLHMPRRSVLHVHNVLLQMIR
QDFPIPVKPTNGKTKDAHAEKGHVWEVRHAGLLGIKYEVAVRSDLVSMDIPEDDDMEIDD
GKEVLRGVVDAAVLGLGDRDDDVRSVASSCLLPVAAYLVRRLPEELPRVLAVLWSCLRDM
KDDLSSSVGAVMDLLGQLVAYPHVIEIIADESRSHPITTLAPTLFPFFRHTIANVRLAVV
KTLHTFMTVEHLSRAWITVPFLRLLFQNLVVEERLDIRQATLATWRETLSILSSTPGWME
SCVTQPILLEWYAVLMTPLGLPLDASSFYDPTVGTDSGGPSERHNVDKNMLAQDLSLITI
EVVIQARLAASSALAYIIAFWPLTSEQSFSVDEMFKPILTHYIDSASMLQKFLAAIISEC
WAREYDTRAAPGAPLLIQASPLALELSEKTLAWLQADPPAAYHEMALTLARIHGECLNLL
QSFAYDCKLPQAAIPLLGTDIDVTGTKPGCFTIDTAHAAIGDMFTKLKDSLGRTKKRELA
IIKEKRLKVVSSIERYIEVKAQYDVRVSAAFAAAFVAFKSTPDKVSPIVKGIMNSIKTEE
NLDLQTHSAAAVALFVEFCVQRDLGQPPDKIVKNLCTFLCQDVEQTPTFLYNRKILDGVL
SFTKPSSASAAASNGKDGGDKHGEDPAKARLSRRGARLAFEKLSAKFGPRLLQAVPKMWQ
SMAGGLLSACATDSVKKMDELLEKQHGQDVIDSLSVLEAVVPTFHEELSHHFTELFPHVV
LALRSRFAIIRQSAARCFSTMCDVLTMDAMRYVIEQVVPFLGDASVLSNRQGAIELIYHI
VQKLDIKALPYVIFMVVPVLGRMSDPDDDVRATATNTFASLVKMVPLEAGLPDPTNFPED
LLKRREEERQFLTQLLDGSKVQQYDIPVAIKAELRKYQQEGVNWLAFLAKYQLHGILCDD
MGLGKTLQSICILAGKHYERAQRYKETKAPDSKHLPSLIVCPPTLTGHWYYEILKYAENL
KPVLYTGNSRERNKLLPKLKSYDIVVTSYEVVRNDVASLQDINWHYCVLDEGHIIKNAKT
KLTKAVKCIKAVHRLILSGTPIQNNVLELWSLFDFLMPGFLGTESSFNERFSKPILSNRD
GKAKTGEAAALALEALHKQVLPFLLRRLKEDVLNDLPPKIIQDYYCELSELQKFLYDDFS
KSSAKMEVDDVVRSHKEKDGEQQHIFQSLQYLRKLCNHPALVLKSDKQAIKEALANCGAH
SSTGDLSDIQHAPKLLALRQLLVDCGIGIAAGATGDATKSELVDTDETGHGAFSQHRVLI
FCQMKQMLDIIETDLFKQHMPAVTYMRLDGGTDPKKRHAIVQTFNADPSIDCLLLTTHVG
GLGLTLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITKGTLEEKIMGLQR
FKLNIANSVVTQQNAGLSSMDTDLVLDLFKRTSEEEDAAAAAKKKEKDPSAPPGAKNVLR
GLEDLPPEEEYQELDVKSFMSSLGGKQ
NT seq
5844 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgaggttggaccggctcctcctcctgctcgatacggggtcttctgcgtccgtg
aggaccactgctgccaaacaactagctcaacttgccgcgaagagcgtcatcagcgacgtc
gcaatcgtcgaggacgatgtaaagaccaacagacaccatgcggccgtcggcgatccctcc
gggtggtcggagctgatggccgttttggcaagaattcttccatacctgcactcccgatca
cacgagacacgcacggcagcctccactgcgctctcacagatattctcactcgtcccgctc
tggacgcccggtccaggcgcggaggcgaaaccctacggtgcatctctcacactacccgca
ccggagttcccgtccttctccgtgcgcgagctcatggagaagggcacgctgctcctcgcc
tcctccggcaaggagttcatcaagccgacaggcattctcgcgaactcgaacgaagttaag
aaagcgcggagggaggctatggggcgcctcggtctcgacttcctcgagagcgtcggcggc
gcggacgacatggacctcgacaaggagctcgccgcagaggacgcagatccggacgtcgag
atggctccgccgacgagtcctgcagtgaagagtgaggacgagtccgtgcccatctcgcca
atcgaagagcctgtcgacgttaaggttaagaaggaggaggcgatggctggacggtcgaag
tcgtcgacgcccgccgcaccttcactcaccacgacacccgcgccggaggacatgtcagcg
ctatccgcaagagagcgcaatcgactgaagcgcaagcggaaaccggggaatgcggccgtc
gtcgccgctcctccgccgtctcagggcgccaacgcgaagtttcaggctgcgtccgcagga
ccagcgaaagctcgtctggttgtcaacggcgataagtctgcgcccaaacgtacagacagc
cctaagtcgccaacggatggtcctgcgccggaccgtgtcgtcgtcgacccgtcaaagggc
ggcgccgtcgcgcccaagacggagagcaagtcgaaggcgctcgaggttcagcctgggtgc
tgggtctgggatggcctggtcaagctgcttgaggtcgatttgttcagtgcagcttgggaa
gtacgtcatggtgccgccatggcgctacgagagctactgaaggtgcaagggaagtacggc
ggcatgagagcgggcgacatcgagtgggacgagaacctcgtcgctcacgagaagtggtgc
aatgatctcgctgtgaggttcttgtgcatcttcgttctcgaccgctttggagacttcgtc
tctgatcaggtcgtagcgccggtgcgcgaaacggtctcacagaccctcgcctccctcctt
ctccacatgccgcgccgatcagtgctacatgtccacaacgtcctgcttcagatgatccgc
caggacttccctatccccgttaaacccacgaacgggaagacgaaggacgctcatgcagag
aaaggccacgtctgggaagtccgtcatgccggacttctcggcatcaaatatgaggtcgct
gtccgcagtgaccttgtcagcatggatatcccggaagacgacgacatggagattgatgac
gggaaggaggtcctgaggggcgtggtcgatgctgcggtcctcggtctaggagatcgggac
gacgatgtgcgatccgttgcgtcgtcgtgtttgctacctgtagcggcctacctcgtcagg
cggttaccggaggaactcccacgagtacttgccgttctctggagctgtctaagagacatg
aaggacgatttgagttcgagcgttggtgcggtaatggatctcttaggccaactagtcgca
tacccccacgtcattgagatcattgcggacgagtcgcggtcacatcccatcaccactctt
gcgcccacgttattcccgttcttccggcacacgatcgcgaacgtacgcttggccgtcgtc
aagaccttgcacacattcatgactgtggagcatctgtcgcgagcgtggatcaccgtgccg
ttcctgcgcctgctgttccagaatctggttgtggaggaacgtctggacattcgccaggcg
accctcgccacatggcgcgagacgctctccatcctcagctcaacaccagggtggatggag
tcttgcgtcacgcaaccaatccttttggagtggtatgcggtgctgatgacaccactcggg
ttacctttggatgcgtccagcttctacgaccctaccgtcggtaccgacagcggtggacca
tcagagcgccataacgtcgacaagaacatgcttgcgcaggatctttccctcatcaccatc
gaggtcgtgattcaagccaggctagctgcctcctctgcgttggcgtacattattgccttc
tggccgctcacgagcgagcaatccttctcggtcgacgagatgttcaagccgatcctgacc
cactacatcgactccgccagcatgcttcagaagttcctcgcagcaatcatctccgagtgc
tgggcgcgcgagtacgacacgcgcgccgcccccggcgccccgctgctcatccaggcctcc
ccgctcgccctcgagctctcggagaagacgctcgcgtggctgcaggcggacccgccagct
gcgtaccacgagatggcgctgacgctcgcgcgcatccacggcgagtgcctgaacctgctg
cagtcgttcgcgtacgactgcaagctcccgcaagcggcgatcccgctgctcgggacggac
atcgacgtgacgggcacgaagccgggctgtttcacgatcgacaccgcgcacgcggcgatc
ggggacatgttcaccaagctcaaggacagcctggggcgcacgaagaagcgcgagcttgcg
atcatcaaggagaagcggctcaaggttgtgtcgagcatcgagcgctatattgaggtgaag
gcgcagtatgacgtgcgcgtctccgcggcgtttgcggctgcgttcgttgcgttcaagagt
acgcccgacaaggtcagcccgatcgtgaagggcatcatgaacagcatcaagaccgaggag
aacctcgacttgcagacgcactcggcggcggctgtagcgctcttcgtcgagttctgcgtt
cagcgcgacctcggccaacctccggacaagattgtcaagaacctctgcacgttcctgtgc
caagatgtcgaacagacgcctactttcttgtacaacaggaagatcctcgatggcgtcttg
tcattcacgaagccatcctctgcctctgcggctgctagcaacggcaaggacggcggtgac
aagcacggcgaagaccctgcgaaggcgcggttgtcgcgtcgcggtgcgaggctcgctttc
gagaagctctctgccaagtttggtccgcggttgttacaggctgtacccaagatgtggcag
tccatggccggaggtctgctcagcgcgtgcgctacagactccgtgaagaagatggacgag
ctgctcgagaagcagcatgggcaggatgtgatcgactccctgagcgtgctcgaggccgtc
gtccctaccttccacgaggagctttcgcaccatttcacggagctcttcccgcacgtcgtc
ctggctcttaggagtcggttcgccatcatacggcagtcggcagcgcggtgcttctcgacc
atgtgcgacgtcttgaccatggatgccatgcgctacgtgatcgaacaggtagtacccttc
cttggtgacgcgtcggttctatcgaatcgccagggtgccatcgagttgatataccacatc
gtccagaagctcgacatcaaggcgttaccgtatgtcatattcatggtagtacccgtccta
gggcggatgagcgatcccgacgatgacgtccgcgccaccgcgacgaacacgttcgcttcg
ctggtcaagatggttccgctagaggctggccttcctgatcccaccaacttcccagaggac
ctgctcaaacgacgcgaggaggagcggcagttcctcacacagctccttgacgggagcaag
gtgcaacagtacgacatccccgttgcgatcaaggcggagctgcgcaagtaccagcaggag
ggtgtcaactggcttgcattcctggcgaagtaccagttgcacggcatcctgtgtgatgac
atgggtctcggcaagacgctccagtcgatttgcatcctggctggcaagcactatgagcga
gcgcagaggtacaaggagaccaaagcccccgactccaagcacctaccttcactcatcgtg
tgcccaccgacgctcacgggtcattggtactatgagatcctgaagtacgcggagaacttg
aagccggtcctctacaccgggaactctcgtgaacggaacaagctcctgcccaagctgaag
tcctacgatatcgtggttacttcgtatgaggtcgtcaggaacgacgtcgcgagcctgcag
gacatcaactggcactactgcgtcctcgatgaaggtcacatcatcaagaacgcgaagact
aagttgacgaaggccgtcaagtgcatcaaggccgtacatcgtctcatcctctccggtact
cctatccagaacaacgtcctggagttgtggagcctcttcgacttcctgatgcccggcttc
ctcggtaccgagtcgtcctttaatgagcgtttcagcaagccgatcctctccaatcgtgat
ggcaaagcgaagacaggcgaagcggctgcgctcgcactcgaggccctgcacaaacaagtc
cttcccttcctgcttcggcggctcaaggaagacgtcctcaacgaccttcccccgaagatc
attcaggactactactgtgagctgtctgagctgcagaagttcctgtacgacgacttttcc
aagtcgagcgcgaagatggaggtcgacgacgtcgtccggtcgcacaaggagaaggacggc
gagcagcagcacatcttccagtcattgcagtacctccggaagctctgcaaccaccctgcg
ctcgtcctcaagagtgacaagcaggcgattaaggaggcccttgcgaactgcggtgctcat
tcatcgaccggtgacctcagcgacatccaacatgcccccaagctgcttgcgcttcgccaa
cttctcgtcgactgcggtatcggtatcgcggctggcgcaaccggtgacgcgacaaagtcc
gaactcgtcgacaccgacgagaccggccacggcgcgttctcgcaacaccgcgtgctcatc
ttctgccagatgaagcagatgctcgacatcatcgagacggacctcttcaagcagcacatg
cccgcggtgacgtacatgcggcttgacggtgggacggatcccaagaagcgtcacgcgatc
gtgcagaccttcaacgcggacccgagtattgactgcctcctgctgacgacacatgttggt
gggctgggcctcacgctcactggggcggacacggtcatcttcgtcgagcacgactggaac
ccgatgaaggacctccaggctatggatcgtgcgcatcgtatcgggcagaagaaggtcgtc
aacgtgtaccgtcttatcaccaagggcactctggaagagaagatcatgggcttacagcgc
ttcaagctcaacatcgcgaactcggtcgttactcagcagaatgcgggcctgtcatcgatg
gacacggacctcgttctggacctcttcaagcgcacatcagaagaggaggacgcggccgcc
gccgcgaaaaagaaggagaaggacccgagcgcgcccccgggcgcgaagaacgtcctgcgc
gggctggaggacctcccgcccgaggaggagtaccaggagctggacgtgaagagcttcatg
agctcgctgggcgggaagcagtag
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integrated database retrieval system
