KEGG   Trametes versicolor: TRAVEDRAFT_59949
Entry
TRAVEDRAFT_59949  CDS       T04795                                 
Name
(RefSeq) DUF1744-domain-containing protein
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
tvs  Trametes versicolor
Pathway
tvs03030  DNA replication
tvs03410  Base excision repair
tvs03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tvs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TRAVEDRAFT_59949
   03410 Base excision repair
    TRAVEDRAFT_59949
   03420 Nucleotide excision repair
    TRAVEDRAFT_59949
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tvs03032]
    TRAVEDRAFT_59949
   03400 DNA repair and recombination proteins [BR:tvs03400]
    TRAVEDRAFT_59949
Enzymes [BR:tvs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TRAVEDRAFT_59949
DNA replication proteins [BR:tvs03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    TRAVEDRAFT_59949
DNA repair and recombination proteins [BR:tvs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      TRAVEDRAFT_59949
SSDB
Motif
Pfam: DUF1744 DNA_pol_B_exo1 DNA_pol_B DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 19418124
NCBI-ProteinID: XP_008041403
JGI: 59949
LinkDB
Position
Unknown
AA seq 2241 aa
MYFIPIPKYKHTRYPRDNETMGFIFQGGVGAGGGRGRGRGRGGGGVPSDAQPLRDEEGNQ
LTERFEQVKTNDEVDEKLGFARVQEGPLREGWLINMHPTLMKDADWPGGKAAVDFYFIQD
DGGMFKCTLQYEPYFYIACKSGMETVIEEWLLKKYEGAICRITRERKEDLQMPNHLMGHT
RLYLQLHFRNVSDLLTVRRDIMPLALANSAKLDAVDAYAEVVNATAAAATNIELEGEWAA
GVGGGSSRRTGVRDQDPREGIIDIREYDVPYYLRVAMDNDIRVGLWYAVSFTAGQPGFKL
LTERVKRADPVVMAYDIETTKAPLKFPDQAIDQVMMISYMIDGQGFLITNREIVSEDIDD
FEYTPKEGYEGPFTVFNEPDEAAVIRRWFSHIQDVKPTVMATFNGDFFDFPFVAARAKVH
GIDMFLEIGFAIDSEDEYKCRSCVHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPIEL
DPELMTPYAIEHPQILAQYSVSDAVATYYLYMKYLHPFIFSLCNIIPLCPDEVLRKGTGT
LCETLLMVEAFRGQIIMPNRHEESHGNMYDGHLLASETYVGGHVEALEAGVFRSDIETHF
KIEPSAVQKLIDDLDAALTFCIVEESKSSLEAVTNYDEVKAAVQAKLEVMRDNPQRMDQP
LIYHLDVAAMYPNIMLSNRLQPDSVVNEATCAVCDFNRPGKECDRKLQWAWRGEFFPARR
DEFNMIKHALNQESFPPKKPGGPQRKFNDLPQAEQTALLHKRLGDYSRRVYKKIKDTKIE
TREAIICQRENPFYIDTVRRFRDRRYEYKGLHKTWKKNLDVVVGEQRSIAEVDEAKKMIV
LYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGITCLTGAKIIQMARQLVEQIGRPLEL
DTDGIWCMLPGVFPENFKFKLANGKALAFSYPCTMLNHLVHAEFTNHQYHELDPEAGEYM
VHSENSIFFELDGPYKAMILPSSKEEDKLLKKRYAVFNDDGSLAELKGFEVKRRGELQLI
KIFQSQIFEKFLLGSTLDECYAAVAQVADRWLDVLFSHADDLSDEELVELIAENRSMSKT
LAEYGGQKSTSISTARRLAEFLGDQMVKDKGLACKFIISSKPMGAPVTERAVPVAIFSAE
ESVKRTYLRKWLKDNSLTNFELRSILDWDYYIERLGSVIQKLITIPAAMQKVTNPVPRIR
HPDWLFRRVAALDDKFHQHKVTDFFKAAPKPVASDSMDIEDTMTQRTQDSAPRLATVYRK
SQRRQETPEETPADKLLAEPLPDVHKSYSKWLKVMKRRWSHRRGDISGDGTVMPSMFRGV
RTKQSTHWDIVQIRPNRTPGRFTLWLSVDGTLSAVPLRIPREFYMHLRTPPKEDQFNHEM
YQCEKVVRSLPRDRQCVNLYKITVREDLYVDGQEHFIDITNDPNVDGVYEFQLPLVMRSI
LKLGKTCFNEDKTMTLNRAETTGFDLQQLSRSKPSESKRKYLDEGADGKYIFLYHACSNN
APVHVFALFIPGEGVKLHIVDPATRRQPIPRLSEMYEKLLGQSKTGPYISYTYPEDLQFT
STYHGNDVTALKAISRELGLVENRSFIVVVSSSKEQSYFDLHTPKLSKFPVLSMNKTKSA
HSLDVFPWQTSVAQKLVSRYLSLGKWLDTAMAQADYYDIPVGHIEGDKPLLLADVEFARR
LMSQDVVLWWSPGDRPDLGGIEEDNRPQEELAKTEFTSPGCYSNVCLEITVRNLAVDAVL
HSVIVNELEGSGGATAFDASRTLDEYSKGDAMQDLTLGESNVSPLAFSILKSLVKTWMLD
KIQGNFQSPATTVLDHFWRWISSTASHMYDTSIHRFIHGLMRKTFIQMLAEFKRLGSHVV
YADLSRILLVTSKPPGTAHAYATYITTAVTSHELFQHVYLHTERFYDFLIFMDEANYGAV
VCENPLAIEPPEELAIEMRWNIQSFLPPAIQSDFRALVRYFLVEFFRTSQKCKGATRVPL
RALQNAAPDATQLDVTKANEISACREFVQRKLIRRTLRMLGAVLDRHRDALTSEDPSALV
QWDFPVLPGSHLHLTNPGLEFAKFACAVFALAKEHTLEVGLLKRSLLELVGVREFAPEAS
FQNPCEPLKLASVPCQHCDAMKDFDFCRDPALLPSARDPAAGARWLCARCDCEYDRTAIE
FALVRMVGDAERRFAQQDLRCSRCAQLRSDNVAKHCGCSGNYQLTMNKAEVKRRLRTIVN
VALAHNMGRLKEVAQTLLNNW
NT seq 6726 nt   +upstreamnt  +downstreamnt
atgtactttataccaatccccaagtacaagcatactagatatcccagagataacgagacg
atgggtttcatcttccaaggcggagtgggcgctggcggaggccgaggacgaggacgcggt
cgcggtggtggaggggtacccagcgacgcgcaaccattacgcgacgaggaaggaaaccag
ctcacggaacgcttcgagcaggttaagacgaacgatgaggtcgacgagaagctgggcttt
gcccgtgtccaggagggcccactacgagaggggtggctaattaacatgcatccaacattg
atgaaagatgccgactggcctggcgggaaagctgccgtcgacttctacttcattcaagac
gacggcggcatgtttaaatgcacgctgcaatacgagccttacttctacatcgcgtgcaag
agcggcatggaaacagtgattgaggaatggcttctgaagaagtacgaaggtgccatttgt
cgaataacccgcgagaggaaagaagacctacaaatgccgaaccaccttatgggtcacact
cgtctatatctccagctacacttccggaatgtgtcggaccttctcaccgtacggagagac
atcatgcccctggctctggctaacagcgcgaaactcgacgctgtcgacgcgtacgcggaa
gtggtcaacgcgactgctgctgctgcgacaaatatcgaactcgagggcgaatgggctgca
ggcgttggtggaggctcctcaagacgcaccggggttcgcgatcaggacccgcgggagggt
atcatcgacattcgtgaatacgacgtcccatactacctgcgtgtcgccatggacaacgat
atacgtgtcggtctatggtacgccgtgtccttcaccgcggggcagccgggattcaagctg
ctcacggagcgcgtgaaacgtgcggacccggtcgttatggcctacgatatcgagacgacg
aaggcgccgctcaagttccccgaccaggcaatcgaccaggtcatgatgatttcgtacatg
atcgacgggcagggcttcctcatcaccaaccgcgaaatcgtcagcgaggatattgacgac
ttcgagtacaccccgaaggaaggctatgaggggcctttcacggtcttcaacgagccagac
gaggctgcagtcatccggcggtggttctctcacatccaggacgtcaagcctacggtcatg
gcgacgttcaacggagacttcttcgatttccccttcgtggcagcgcgcgcgaaggtgcac
gggatcgacatgttcctcgagatcgggttcgccatagattccgaagacgagtacaagtgt
cgttcatgtgttcacatggactgcttccgctgggtcaagcgcgactcgtacctgccgcaa
gggagtcagggattgaaggctgtaacgactgcgaagctgggttacaaccccattgaactc
gaccccgagttgatgacgccatacgccatcgagcatccgcagattctcgctcagtactcc
gtctccgatgcagttgcgacgtactacctttacatgaagtacctgcaccccttcattttc
tccctgtgtaacattatcccgctttgcccggacgaggtgttgcgcaagggaacgggcact
ctgtgcgagacgctcctcatggtggaagccttccgaggtcagatcatcatgcccaacaga
cacgaagagtcccacgggaacatgtacgacgggcatcttctcgcgtcggagacctacgtc
ggtggtcacgtcgaggcgctggaggctggcgtattccggagcgacattgagacccacttc
aagatcgagccatctgccgtacagaagcttatcgacgaccttgatgccgcattgaccttc
tgcatcgtcgaagagtctaagtcctcgctggaggctgtcacgaactacgacgaggtgaaa
gcggcggtccaagcgaaactcgaagtgatgcgagacaacccgcaacgcatggaccaaccg
ctcatctaccacttggatgtcgccgcaatgtatccgaacatcatgttgtccaatcggctc
cagccggattcagtcgtcaacgaggcgacttgtgcggtctgcgacttcaaccgccctggg
aaggagtgcgaccgcaagctgcaatgggcgtggcgtggcgagttcttccccgcgcggcga
gacgagttcaacatgatcaaacacgcgctcaaccaggagagcttcccgcccaagaagcca
ggcggtccacagcggaagttcaatgacctgccccaggccgagcagactgcgctcctgcac
aaacgactgggcgactactcgcggcgggtgtacaagaagatcaaggacacaaagatcgag
acccgggaggcgatcatctgccagcgcgagaacccgttctacatcgacaccgtgcggcgg
ttccgcgaccggcggtacgagtacaagggcctgcacaagacgtggaagaagaacctggac
gtcgtggtcggggagcagcgctcgatcgcagaggtcgacgaggcgaagaagatgatcgtg
ctgtacgactcgctgcagctcgcgcacaagtgcatcctgaactcgttctacgggtacgtc
atgcgcaagggcgcgcgctggcactcgatggagatggcgggcatcacctgcctcaccggc
gcgaagatcatccagatggcgcgccagcttgtcgagcagatcggccgcccgctcgagctc
gacacggacgggatctggtgcatgctgcccggggtgttcccggagaacttcaagttcaag
ctcgcgaacgggaaggcgcttgcgttctcgtacccgtgcacgatgctcaatcacctcgtc
cacgcggagtttacgaaccaccagtaccacgagctcgaccccgaggcgggcgagtatatg
gtgcacagcgagaactcgatcttcttcgagctcgacgggccgtacaaggcgatgatcctc
ccgtcgtcgaaggaggaggacaagctgctgaagaagcggtacgcggtcttcaacgacgac
ggctcgctcgccgagctgaagggcttcgaggtcaagcggcgcggcgagctgcagctcatc
aagatcttccagagccaaatcttcgagaagttcctgctcgggtcgacgctggacgagtgc
tacgccgcggtcgcgcaagttgcggaccgctggctcgacgtgctcttcagccacgcggac
gacctgtcggatgaagagctggtcgagctcatcgccgagaaccgcagcatgtccaagacg
ctcgccgagtacggcggacagaagtcgacgtcgatcagcaccgcgcgccgcctcgcagag
ttcctcggggaccagatggtcaaggacaagggcctcgcgtgcaagttcatcatctcctcg
aagccgatgggcgcgcccgtcaccgagcgcgccgtccccgtcgcgatcttctcggccgag
gagagcgtgaagcggacgtacctccgcaagtggctcaaggacaacagcctgacgaacttc
gagctgcgctcgatcctcgactgggactactacatcgaacggctcggctccgtcatccag
aagctcatcaccatccccgccgcgatgcagaaggtcacgaaccccgtgccgcgcatccgc
cacccggactggctcttccgccgcgtcgcggcgctggacgacaagttccaccagcacaag
gtcacggacttcttcaaggcggcccccaagcctgtggcgagcgacagcatggatatcgag
gacacgatgacgcagcgcacgcaggattcggctccgcgtcttgcgacggtgtaccgcaag
tcacaacggaggcaggagaccccagaggagacccctgcggataagctactcgcggagcct
ctgccagatgtgcacaagagctacagcaagtggcttaaggtcatgaagcggcgctggagc
cacaggcgaggggatatctctggtgacgggaccgtcatgccctccatgttccgcggcgtc
cggacgaagcagagcacgcactgggacattgtccagatccgcccgaacaggaccccaggt
cggttcacgctgtggctctcggtggacgggacgctctctgcggtaccccttcgcattcct
cgcgagttttacatgcatctgcggacgcctccgaaggaggaccagttcaaccacgagatg
taccagtgcgagaaggtcgtgcggagcttgcctcgcgatcgccagtgtgtcaacctgtac
aagatcaccgtgcgggaagacctctacgtggacggccaggagcacttcatcgacatcacc
aatgaccctaacgttgacggtgtatatgaatttcagctgccgctcgtcatgcgctcgatc
ctgaagctggggaagacatgcttcaatgaggacaagaccatgaccttgaatcgcgcagag
accactgggttcgacttacaacagctgagccgttccaagccctcggaatcgaagaggaag
tacctcgacgaaggcgccgacgggaagtacatcttcctctaccacgcctgctccaacaat
gcccccgtccacgtcttcgcgctcttcattccaggcgagggcgtgaagctccacatcgtc
gaccccgccactcgccggcagccgatcccccgactcagcgagatgtacgagaaactcctt
ggccagtccaagacaggcccgtatatctcctacacgtaccccgaggatctgcagttcacc
tcgacctatcacggcaacgatgtgaccgcactcaaggcgatttctcgcgagctaggactc
gtcgagaaccgctctttcatcgtggtcgtatcctcgagcaaggagcagagctacttcgac
ctgcatacacccaagctgtcgaagttccccgtgctgtcgatgaacaagaccaaatccgcc
cactcactggatgtcttcccgtggcagacaagcgtcgcgcagaagctagtcagccgttac
ctgtctctcgggaaatggctggacacggctatggcacaggccgattactacgacattccc
gtcggccatatcgaaggcgacaagccgctgctgctggcggatgtcgaattcgcgcggagg
ctcatgagccaggacgtcgtgctgtggtggtcgcctggcgatcgaccggacctcggtggt
atcgaggaggacaaccgtccgcaggaggagctggccaagaccgagttcacatctcccggg
tgctactccaacgtctgcttggagatcacagtccgcaacctcgcggtggacgctgtgctg
cactccgtcatcgtcaatgaactcgaaggtagcggtggcgcgacggccttcgacgcgtca
cgcaccctagacgaatactccaagggcgacgctatgcaagacctcacattgggcgagtcc
aatgtgtcaccgctagcgttcagtatcctcaagtcgctcgtgaagacgtggatgctggac
aagatccagggcaacttccagagcccggcgactaccgtgctcgaccacttctggcgatgg
atcagctcgacggcgtcgcacatgtacgacaccagcatacatcgcttcatccacggactc
atgcgcaagacgtttatccaaatgctcgcggagttcaagcgcctcggatcccatgttgtc
tacgccgacctcagccgcattctcctcgtcacttccaaaccacccggaactgcacatgct
tacgcgacgtacattaccaccgcagtcacctcccacgagctcttccagcacgtctacctc
cacacagaacgtttctacgactttctcatattcatggatgaggccaactacggcgcggtt
gtctgcgagaacccgcttgccatcgaacccccagaggagctcgctatcgagatgcgctgg
aacatccagtccttccttccccccgccatccaatccgacttccgcgccctcgtgcgctac
ttcctcgtcgagttcttccgcacctcgcagaagtgcaagggagccacccgcgtacctcta
cgcgcgcttcaaaacgcggccccagacgcaacacagctggacgtgaccaaggccaacgag
atctccgcctgccgcgagtttgtccagcgcaagctcatccgacgcaccctgcgaatgctc
ggcgcagtcctcgaccgacaccgcgacgcactcaccagcgaagaccctagtgcactcgtg
cagtgggacttccccgtcttaccaggctctcacctccatctcaccaacccggggctcgag
ttcgccaagtttgcatgcgcggtgttcgctctcgcgaaggagcacacgctcgaggtcgga
ctcctcaagcgctctctcctcgagctcgtcggcgtgcgcgagttcgcgcccgaggcctcc
ttccaaaacccgtgcgagccgctcaagctcgcgagtgtgccgtgccagcactgcgacgcg
atgaaggacttcgacttctgccgggaccccgcgctgctgccgtccgcgcgcgacccggcg
gcgggggcgcgctggctgtgcgcgcgctgcgactgcgagtacgaccgcacggcgatcgag
ttcgcgctcgtgcgcatggtgggcgacgccgagcggcgcttcgcgcagcaggacctgcgc
tgctcgcggtgcgcgcagctgcggtcggacaacgtcgcgaagcactgtgggtgctcgggc
aactaccagctcacgatgaacaaggcggaggtgaagcggcggctaaggacgattgtgaac
gtcgcgctggcgcataatatgggtcgtttgaaggaggtcgcccagacgctgctcaacaac
tggtag

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