KEGG   Trametes versicolor: TRAVEDRAFT_60413
Entry
TRAVEDRAFT_60413  CDS       T04795                                 
Name
(RefSeq) PIN domain-like protein
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
tvs  Trametes versicolor
Pathway
tvs03030  DNA replication
tvs03410  Base excision repair
tvs03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tvs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TRAVEDRAFT_60413
   03410 Base excision repair
    TRAVEDRAFT_60413
   03450 Non-homologous end-joining
    TRAVEDRAFT_60413
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tvs03032]
    TRAVEDRAFT_60413
   03400 DNA repair and recombination proteins [BR:tvs03400]
    TRAVEDRAFT_60413
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tvs04147]
    TRAVEDRAFT_60413
DNA replication proteins [BR:tvs03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    TRAVEDRAFT_60413
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     TRAVEDRAFT_60413
DNA repair and recombination proteins [BR:tvs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     TRAVEDRAFT_60413
Exosome [BR:tvs04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   TRAVEDRAFT_60413
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-GeneID: 19418184
NCBI-ProteinID: XP_008042397
JGI: 60413
LinkDB
Position
Unknown
AA seq 525 aa
MGVLGLAPFLQKTCPEVVKTLPDRLKSLAGKKVVIDGTLITQRFHFAPFPHAARHVLGWY
RLIKHLQHSNVEAICVFDGKERSAVKEREVERRRKDRKLTASRGTFEVDRLSRLRQLTKL
LHTWRHLGETGTIAQQLSPLKNIVQKSGIPALPPARISGKGLELNDDTPIYYVQHDQAIA
FHLESPRKSSDADNTGEPPYSLAPPGSPADISQLYEEYKHSIPHIPSLAESPTAEPPASI
TSVSGVSSADVEEAQVEYALSKNQHNLMMEEGRLWQGLAHSDDPEAVESILRSLAEELET
KSSLLSESYDRRTHPPTSETYEQSKEILQAMGVPYITPSGPFEAEALAASLVIHGYADYV
ASEDTDVLVYEAPLIRNITSSSGPLVLISGADVRTVLQLDRPGYIDFALLLGTDFSQRIK
NVGPARALKFIREHGSIERVLEHERQYPPRIPKAEYLQQVQLARDVFQTLPPTPDRALLQ
QGEVDEDAVLAILEKYGLSRYVQAEDWDYGQALAGNYFSDNPIAE
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgggcgtgctgggactcgcaccgttcttacagaagacttgtcccgaagtcgtaaagact
ctaccagaccgactaaaatcgcttgcgggaaagaaagtcgtaattgatggtactctcatc
acccagcgatttcatttcgctccattcccgcatgcagcgcggcatgttcttggctggtac
cgtctcatcaagcatctacaacattccaacgtcgaagccatctgtgtgtttgatgggaag
gagcgtagcgccgtgaaagaacgagaggtagaaagaagacgcaaggaccgcaaactcact
gcctctcgtggtacctttgaagtcgatcgcttgtcccggcttcgccaactgaccaagttg
ttgcacacatggcgtcacctcggggaaactgggacgattgcacaacagctgtcacctctc
aaaaacatcgtgcaaaaatctgggataccagcactccccccggctcgcattagcggcaaa
ggcttggagttaaacgacgatacccccatctactatgtgcaacatgatcaagccattgcg
ttccatctagagtcaccgcgcaagtccagcgacgccgataacaccggcgaacctccatat
tcactcgcgccaccgggttctccggcagacatctcccaactctacgaggaatacaagcac
agtattccgcatataccgtctttggcagaatcgcctaccgcggagcccccagcttccatt
acatcggtatcgggcgtgtcctctgcagacgttgaggaagcccaagtcgaatacgcgctc
tcaaagaaccagcataacctcatgatggaggaaggtaggctttggcaaggcctagcgcac
tctgacgacccggaagccgtcgaaagcattctgaggtctctcgctgaggagctcgaaacc
aagagcagccttctttcggaatcgtacgatcgccgcacgcacccccctacatcggaaaca
tacgaacagagcaaggagattctgcaagctatgggtgtcccgtacataacaccctcaggc
cccttcgaagcagaggcactcgcagcatccctcgtaatacacggctatgccgattacgtg
gccagcgaagacaccgacgtcctcgtctacgaagcgcctctcatccgcaacataaccagc
agctccggcccgctcgtgctcatttctggcgccgacgtccggacagtcctgcagctcgac
cgcccgggttacatcgacttcgcgctcctcctcggcacggacttctcgcagcgcatcaag
aacgttggccccgcccgtgcgctcaagttcatccgcgagcacggttcgatcgagcgcgtc
ctcgagcacgaacgccagtaccccccgcgcatccccaaagcggagtacctgcagcaggtc
cagctcgcgcgggatgtcttccagacgttgccccctacgcccgatcgcgcactcctgcag
cagggcgaggtcgacgaagacgcagtgttggcgatcttggagaagtacggcctgagtcgc
tatgtgcaggcggaggactgggactatggacaagcacttgctgggaactacttttctgac
aatcctatagcggagtag

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