Trametes versicolor: TRAVEDRAFT_70355
Help
Entry
TRAVEDRAFT_70355 CDS
T04795
Name
(RefSeq) DNA replication factor C large subunit
KO
K10754
replication factor C subunit 1
Organism
tvs
Trametes versicolor
Pathway
tvs03030
DNA replication
tvs03410
Base excision repair
tvs03420
Nucleotide excision repair
tvs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TRAVEDRAFT_70355
03410 Base excision repair
TRAVEDRAFT_70355
03420 Nucleotide excision repair
TRAVEDRAFT_70355
03430 Mismatch repair
TRAVEDRAFT_70355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvs03032
]
TRAVEDRAFT_70355
03400 DNA repair and recombination proteins [BR:
tvs03400
]
TRAVEDRAFT_70355
DNA replication proteins [BR:
tvs03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
TRAVEDRAFT_70355
DNA repair and recombination proteins [BR:
tvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
TRAVEDRAFT_70355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
Rad17
AAA_30
AAA_5
nSTAND3
AAA_22
AAA_assoc_2
NTPase_1
AAA_18
AAA_16
RuvB_N
AAA_14
AAA_33
Motif
Other DBs
NCBI-GeneID:
19419287
NCBI-ProteinID:
XP_008035860
JGI:
70355
LinkDB
All DBs
Position
Unknown
AA seq
1006 aa
AA seq
DB search
MARKPQAPTKSHGKDIRGFFGGPAAASSSQGASQATNASRHKNETVKAKATIEFSDDEEP
KKKPTSPKKPAPTKIAAKPQVQKLKSEEVMEIDDDDDEPVRVQPVKRKKAAIVESSDEED
MARESPPKKKPAVAAPSASKPRASTSAVKPEPKAKETKPTKQSTPRKAPAPRKAAPARKK
AKDDDFIASSEEDDNDGEFKLDDDDEEIVQKGKSKPSAKKTPAKPTPAKSSTKVKAEGAD
KPTKAAEKKPVKDAEKKSTPAEAKVDDASVKKPNWYAMKASRAAGPSNPGSKEIPVPKDP
NCLAGLSFVFTGELSSLAREEAVELAKRYGGRVVGQPSSKTSYVVLGSDAGPSKLKAIEK
NKLKTLDEDGFLNLIATRVVDESALDDKARKKIEKEKEAIRDSAKEMERREKQTAKTTAG
TSAKPAASNQLWTQRYAPQTLKEICGNKGQVEKLQEWLGSWSGSLQCGFKKPGKNGMNIY
RAVMVTGPPGIGKTTSAHLCAKLAGFTPIELNASDARSKKLVENSTNIMNASLDGWMHGG
HATNAVGMTITDKSCLIMDEVDGMSAGDRGGVGALCALIKKTKIPIICIANDRGAQKLKP
LTNVTFNLSYRRPEATAIRSRILSIAFKEKLKIPANVIDQLVQGAQSDIRQVLNMLSTWK
LSNTEMDFDEGKTLVKMNEKYTVMTPFGVINKMLGPQMFSPTSRETLGDKIELYFHDPSF
VPLFMQENYLKTQPSRIRNTDGPEKTLKHLELMYKAAESLSDGDIVDSLIHGPNQYWSLM
PLHAVCSTVRPASFLYGMGAGYGGPNAMSFPQWLGQNSKQSKLSRQLTDVQARMRLKVSG
DKAEIRQSYIPSLFPHIVKPLTEKGASAVDDVIETMDEYFLTREDWDTIVELGVDERADA
HVLKKISTATKTSFTKKYNSRDHPIAFHKAETLGKVPKKLASAGPAPDLEEAFDIDEDVA
DEAEDDKGNASDDAAENDTLIKKPRGKSKATPAPSKGSKGKTVKKG
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtaaacctcaggcgccgaccaaatcgcacgggaaggacattcgtggcttcttc
ggtggcccagcggctgcaagcagctctcagggtgcatctcaagccacaaacgcatcgcgg
cacaagaatgagacggtcaaggcgaaggcaactatagagtttagcgacgacgaggagccg
aagaagaaaccgacgtcccccaagaagcccgcacccactaagatagctgcgaagccgcag
gtgcagaagctgaagagcgaagaggtcatggaaattgatgacgatgacgacgagccagtt
cgcgtccaacccgtgaaacgcaagaaggcagcaatagtcgagtcgagcgacgaagaggac
atggccagggagtccccgccaaagaagaagccggccgtagcggccccgtccgcatctaaa
ccccgtgcaagtacatcggcggtgaagcccgagcccaaggcgaaggagacgaaacccacg
aagcagtccacaccgcgcaaggcccccgcgcctcgaaaggccgcgcccgctcgcaagaag
gctaaagacgacgatttcattgcatcttctgaggaggacgataacgatggcgagttcaag
ttagatgacgacgacgaagagatagtacagaagggcaagagcaagcccagcgcgaagaag
actcccgcgaaaccaacgcctgcaaagtcttcaaccaaggttaaggccgagggagcggac
aaaccaacgaaggccgcagagaagaaacctgtgaaggatgcggaaaagaagtcgacacct
gcggaggccaaggtggatgacgccagtgtgaagaagccgaattggtatgcgatgaaagcc
tcacgcgcggcaggtccttcaaatccaggctcgaaggagattccagtcccgaaggacccc
aactgtcttgcgggacttagcttcgtgttcacaggcgagctcagcagccttgcgcgcgaa
gaggcagtcgagctggcgaaacgctatggcgggcgagtcgtcggccagccttcctcaaag
acttcctacgtagttctcggatcggacgctggcccaagcaagctgaaggcgatcgagaaa
aacaagctgaagacgctcgatgaggacggctttctgaatctcatcgcgacgcgcgtggtt
gacgagagcgcactcgacgacaaggctcgcaagaaaattgagaaggagaaggaggcgatc
cgcgatagcgcgaaagagatggagcgccgtgagaagcaaacggcgaagacgactgccggc
actagcgcgaagcccgctgcgagcaaccagctatggacccaacggtatgcaccgcagacg
ctcaaggagatctgcggaaacaagggtcaagttgagaaactgcaggaatggctgggaagc
tggtcagggagccttcagtgtggattcaaaaagcctggcaagaatggtatgaatatatac
cgtgcggtcatggtaacgggcccgcctggaatagggaagacgacgagcgcccatctgtgt
gccaagctggctggcttcacgcccatcgagttgaatgctagcgacgcgcgcagcaagaaa
ctcgttgagaacagtacgaacatcatgaatgcatccttggacgggtggatgcacggtggg
catgcgacgaacgctgtgggcatgacaatcacagacaagtcctgcttaatcatggatgaa
gtggacggtatgtccgcgggtgaccgaggcggcgtcggtgcgctgtgcgctcttatcaag
aaaaccaagataccaatcatctgcattgcaaatgatcgcggcgcgcagaaactgaagccg
ctgaccaatgtcacgttcaatctttcttacaggaggcctgaggctaccgctatccggtcg
agaatcctcagtatagcgttcaaagagaagctgaagatccctgcgaacgtgatagaccag
ctcgttcagggtgcacagtccgacatccgccaagtcctgaacatgctttcgacgtggaag
ctgtcaaacaccgaaatggacttcgatgagggcaagacgctcgtcaagatgaacgaaaag
tatacggtgatgacgcccttcggtgtgatcaacaagatgctagggccacagatgttctcc
cccacatcgcgtgagacgctcggcgacaagatcgagctatacttccacgatccgtcgttc
gtgcctcttttcatgcaggagaactacttgaagactcaaccttctcgtatccggaatacg
gatggccccgagaagaccttgaaacatctcgagctcatgtacaaggcggcggagtcactc
tcggacggtgacatcgttgacagtttgatccacggacctaaccagtactggtcactcatg
ccattgcatgcagtctgctcaacagtccgccctgcatccttcctgtacgggatgggcgcc
ggctatggtggtccgaacgccatgagcttccctcaatggctcgggcagaattcgaagcag
agcaagctgagccggcagctgactgacgtgcaggcccggatgcgactaaaggtctcgggc
gataaggctgagattcggcagtcctacatcccttcgttgttccctcatattgtgaagccg
cttacggaaaagggcgcgagcgcggtggacgatgtgatcgagaccatggatgagtacttc
ctcacgcgagaggactgggatacaatcgtcgagctcggcgtcgacgagcgtgcagacgcc
catgtgctgaagaagatatcgactgcgacgaagacgtcgttcacaaagaagtacaactcc
cgcgaccatcctatcgcgttccacaaggcggagacgctgggcaaggttcccaagaaactc
gcctcggccggccccgcaccggatctcgaggaggcgttcgacattgacgaagatgtcgct
gatgaggcggaagatgacaaggggaacgcttccgacgacgcggccgagaacgacaccctg
atcaagaagccgagaggaaagtcgaaagccactcccgcaccttcgaagggctcgaagggg
aagaccgtgaagaagggctaa
DBGET
integrated database retrieval system
