Trametes versicolor: TRAVEDRAFT_71405
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Entry
TRAVEDRAFT_71405 CDS
T04795
Name
(RefSeq) transcription initiation factor TFIID complex subunit
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
tvs
Trametes versicolor
Pathway
tvs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TRAVEDRAFT_71405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvs03021
]
TRAVEDRAFT_71405
03036 Chromosome and associated proteins [BR:
tvs03036
]
TRAVEDRAFT_71405
Transcription machinery [BR:
tvs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
TRAVEDRAFT_71405
Coactivators
SAGA/TFTC/STAGA complex
TRAVEDRAFT_71405
Chromosome and associated proteins [BR:
tvs03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
TRAVEDRAFT_71405
STAGA complex
TRAVEDRAFT_71405
TFTC complex
TRAVEDRAFT_71405
SAGA complex
TRAVEDRAFT_71405
SLIK complex
TRAVEDRAFT_71405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
CENP-S
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
19419438
NCBI-ProteinID:
XP_008037704
JGI:
71405
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MSKQAPKSRSAPTKVPGIYKTDSVRDVAESLNITNLPDVVASALASDVEYRISQVVEEAA
RFMRHAKRTTLTTADVDQALRVLNIEPLYGHFPYNPPTFRRALPFPQMPSAGPVYFIEDE
EIEFDRALREEKVTLPKGVTWTAHWLAVEGVQPLIPENPPAVPRDIDPESAAAKQGLSTS
ASGSIFPPTPPSSDRPSPIQASKQQPQQHIAVKQVLSRELQLYYTRLTSSLLPPSSDFAK
RAAALASLRHDAGLSPLLPYLVRWVGQGVVDALRSGSQNETDGKVLDVLLDVIGALLDNQ
TLGVEPYLHQLLPSIFSILLHSALPPSHAAHLRNTAAQILSHLLTHYSTTYPGLSSRIVK
TLIVGLIGEGKSRSTREGAIRGLMGIGKEAVRQGLVKHHGAKIIGDDCMPGESSSLVELV
MTDRVKQEGFRLIHSPSRQPVPLNADSGADASVIEDLRSHLGAFFAERVIGDAAWARGIL
SDDAPSA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcaagcacccaaaagcaggtccgcgcctacaaaggtacccgggatctacaag
acggactccgtgcgggatgtggcggaatctctgaacattaccaacttgccggacgtggta
gcctctgctttggccagtgatgtggagtaccggatatcccaggtggtcgaggaagctgct
cgttttatgcgacacgcgaaacgcacaacactgaccaccgcagacgtcgaccaagcacta
cgggtgcttaacatcgaaccgctatacggccacttcccgtataaccctccaactttccgt
cgtgccctcccctttccacaaatgccgtcagcaggtcctgtctacttcattgaggacgag
gagattgagttcgaccgtgctcttcgggaggaaaaggtcaccctgccgaagggcgtaaca
tggaccgcgcactggctagccgtggaaggcgtgcagccgctcataccagagaatccgcca
gcagtcccaagagatatcgaccccgagagcgcagccgcgaagcaagggctgtccacaagc
gcatctggctccatattccctccaacgccaccctcttcagaccgcccgtcgccaatacag
gcctcgaaacagcaaccacagcaacacatcgcagtcaagcaggtgctctcgcgcgagctc
cagctatattacacgcgcctcacgtcatcgttgttaccaccctcttccgactttgcaaaa
cgcgcggctgcactagcgagtttgcgacatgatgcaggtctttccccccttctgccgtat
ctggtccgatgggtaggacaaggcgtcgtagatgcgcttcgaagcggatcacagaacgag
accgacggcaaagttctcgacgtattgctggacgtcataggcgctctgttagacaaccag
accctcggtgttgagccatatctccatcaactcctgccgtctatattttccatcctcttg
cactccgctcttcctccgtcacatgccgcccacctgcgtaacacggccgcgcaaatcctc
tcccaccttctcacccactactcgacgacatacccagggctgtcatcacgtatagtcaaa
accctgattgtcggtctcatcggtgaggggaagagcaggtcgacacgtgagggtgccatt
cgcggtctcatgggaattggcaaagaagccgtcaggcagggcctggtcaagcaccacggc
gcgaagataataggggacgactgcatgcctggggagtccagttcgctcgtcgagctcgtg
atgacggaccgggtcaaacaggagggctttaggttgatacactcaccgtcgaggcagccc
gtgccgctgaacgcggactcgggcgcggacgcgtcggtgatagaggacctgcgcagccat
ctcggtgcctttttcgcagagcgcgttatcggcgacgcggcgtgggcgcgagggatcctc
tccgacgatgctccttcggcgtga
DBGET
integrated database retrieval system
