Trametes versicolor: TRAVEDRAFT_71533 Help Entry TRAVEDRAFT_71533  CDS       T04795                                  Name (RefSeq) uncharacterized protein   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism tvs  Trametes versicolor Brite KEGG Orthology (KO) [BR:tvs00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:tvs03021]     TRAVEDRAFT_71533 Enzymes [BR:tvs01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      TRAVEDRAFT_71533     5.6.2.5  RNA 5'-3' helicase      TRAVEDRAFT_71533 Transcription machinery [BR:tvs03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      TRAVEDRAFT_71533 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel AAA_19 AAA_30 UvrD-helicase Viral_helicase1 nSTAND3 AAA_22 ResIII Motif Other DBs NCBI-GeneID:  19419461 NCBI-ProteinID:  XP_008037811 JGI:  71533 LinkDB All DBs Position Unknown AA seq 1937 aa AA seqDB search MAPQPHNRDVAKKKLVELRDSPKTLVGDEDLRITSIYLLGSLKPADNTSETPLAHDHWFC SQADEVTREAAIFLIRLHAYNSASVDIWRLQLKRVITRCCYCVRGLHEAETMSRHTYFGA FGEQILQNFYVSFHKFLTDTAVEALAEKGFVASDTGDPSRTLAEAPPAVTFLVLTYLHML QDSRIVALLHSFCPRAPIKSWPSDIPPPVLLALLFDGTAEVRSWAQKQSTLCEVAPIPTD NFLPAHATVLKAAADSIASSRPLSDSFGSDYKLSFVTDIPSRWSSLTTLLRFIPVEHFRS SKSFDLDVRRIVIGHLHDIGEHFIDILKCFVIVLRRMGPDVWQDEGPEYAHVVFNSIKDN TRFADVLCNLSVPVPKDDWQLKWIEVYANTVGKLPVFKDILPSVLQFLCEELQHERFKAV RPNAMSIASRLLVAVLAQQGKDGNSKQDLALDLLTVHSSAFVNVAFGRSYTDEIWADARK QTCRLIKQALLTDVRRLVSAITRLCSSNESTAATPPSLIHEQVWKNVYEGIAGGDSDAAA LLLAVLSQISHVDDLKPVAFEEAFKKSKSPSTSQASLVAVNSALAVLRNGFRDVLNRYTD LSPGSAAIELLGRDDVVKHVVSLMFSPVETLQEAAQGIVALAYDVDGRLDCFRALLEHFP DAALSGINDVLGAYIQYAKVVPEACYLSQALARCLTDIIEALCSSPSGLLLQSSYVKTAA STLEDKIPKWWHAMTEALCVIFAYTPRWARFFENEEMVLWMRDALIFGRDLLAQRRILET GTLARSQKGAGSSAKLTNVGKKMVDDLQQVLFELTKWLRLTDEELLHQSFALLETLLECF RQTETRPRAETFQRIQRHIDDARKNDPNRMKSRLDSTRLVRLEEAVSAFDEADEEIQIIS HIKPTKPKKTAKVKEDQKAAPRHILKAGPSKDIQLKDINRKGKAGISSYFSLNDEKKPVA ASSVSRYGVPSVSGRSLPSAGPSRVSKPLIKDERSSAKANSTSSRATSPSSSENEQSEDE EDEGPKGLAALSKLQRTPAIKQPTERRQVKMLDMPLEGRGIKFDRLQKRDDARRTHMRLK PDVSGLHRTLLSWNYEHLGPEPPWDRPKLLPVPDRFRDYAHFRSVFEPILLLECWNQLQE SKETTQESNDVRINNRQYTDQYMDVDISFEGSVSKDWNLSDMDIVLFTHPGSKRRVMGKT QNYRSSYMGIQATVRFLVQGADPGLQVGTVWSLSKVLSLSTLIREYASLMALPHYDLLDS VLHAQLSQPSRTDSGEVQKVMTTYKVNEPQANAIIKSLATEGFALIQGPPGTGKTSTICG LVQLYLARRPKTSSVIHPGRPAERELPKKILLCAPSNAAIDEIAFRLKEGVSGAGHRAEH PKVVRIGALKSMNLSVRDVSMEYLIDQKLNSDPGLKNTKEAGTELSRVRSELEAVKRQRQ EKIEELATIQDNASKTLALEEDVKRLNRQKAMLTHQLDKVKDKQKSDYRTLDATRRRFRN EVLQEADVICSTLSASAYEYLESFDFELVIIDEAAQAIELSSLIPMKYRCRTCIMVGDPQ QLPPTVKSQEACKLGYDQSLFVRLQRSQPEAVHLLSIQYRMHPDISQLPSNLFYGGRLLD GPDMAEKTKRAWQTHPKFGTYRFFNVQAGVEESGAGHSLVNRAEAQVAVALYNRLCKEFS SANMDFKVGVISMYRGQILELRRAFQQRFGEEVLSMVDFNTVDGFQGQEKDIIILSCVRA GPGVQTVGFLRDVRRMNVALTRAKASLFVLGNAPTLERSDETWRKIVENARSRSSLVNVD AAYFTAPVTAAQSKPPSQIKQAKPASKPPSNITPAVPDDLVTPRELKALANRPNGNASSP TGAPTSRKASVAGPSTAVSTEDAQVGQKRKAEETPKEEAARPNGAPGPGPKPRPKPPLVK RPKQGPSLFIPKKRPAP NT seq 5814 nt NT seq  +upstreamnt  +downstreamnt atggccccgcagccgcacaacagggatgtggcgaagaaaaagcttgtcgaacttcgcgac tcccccaaaaccctcgtcggggatgaggatctccgaatcacctcaatctaccttctcgga tcactcaaaccggcggataacacatcagagacacctcttgctcatgaccactggttctgc tctcaggcggacgaagtcacgagggaagccgccattttcctcatacgtctacatgcatac aacagtgcctcggtggatatctggaggctacagctcaaacgtgtcattacgcgatgctgc tactgcgtaaggggtctccatgaggcggagacaatgtctaggcatacgtactttggtgct ttcggggaacagatcctccagaacttctacgtcagctttcacaagttcctcactgacact gcggttgaagctctggcagagaagggtttcgttgcctctgacactggcgatcctagtcgg actttagctgaagcaccccccgccgtcacgtttctggtcttgacatacctacacatgctg caagactctcggattgtcgccctccttcattcgttctgtcctcgtgctccaatcaaatct tggccttccgacataccgccgccggtactgcttgctctcttgtttgacgggactgcagaa gtccgttcatgggcccagaagcagtccacgctatgcgaggttgctccaattccaacggat aactttcttccagcacatgcgaccgtcctgaaggctgctgctgattccattgcgtcctct cgtcctctgagcgactcttttggatcagactacaagctttccttcgtaaccgacatccct tcgcgatggtccagtcttacgaccctcttgcgattcatccctgtggaacattttcggtcg agcaaatcgtttgatttggacgtccgccgcatcgtcataggtcatttgcatgacatcgga gaacatttcatagatatcctgaagtgcttcgtgatcgtcctgcggcgtatgggacccgac gtatggcaggacgaaggtcctgagtacgcgcatgtggtattcaactccatcaaagacaac acgcgtttcgcggacgtcctgtgcaacctctctgtgccggtgccgaaagacgactggcag ctcaagtggatagaggtctacgccaacactgtgggcaagctccctgtgttcaaggacatc cttccatctgtcttgcagttcctctgcgaagaacttcagcacgaacgtttcaaggccgtt cgcccgaatgctatgagcatcgcatctaggctgctggtcgcggtcctcgcgcagcaaggc aaggacggaaactccaagcaagatctcgccctcgacctcttgacagtccactctagcgcg ttcgtcaacgtggcattcggacggtcgtacacggacgagatttgggcagacgcaaggaag cagacatgcaggctgatcaagcaagcgcttttgacggacgtccggaggctcgtctctgcg atcaccaggctctgctcctcaaacgaatcgaccgccgcaactcccccgtccttgatccac gagcaagtgtggaagaacgtctacgaagggatcgctgggggcgattccgacgcggctgcc ctcctgcttgcggttctctctcagatatctcatgtagacgatctgaagccggtcgcgttc gaggaggcattcaagaagtccaagtcccctagcacgtcacaagcctcccttgtcgcggtg aatagcgcactcgctgtcctacgcaacggcttccgagacgtcctcaatcgctacaccgac ctgagcccagggtctgccgcgatagagctcctcggtcgggacgacgttgtcaagcacgtc gtttccctcatgttctccccggtagagaccctccaggaggccgcgcagggtattgttgcc ttagcgtacgacgtagatggccgtctcgactgcttccgtgcgctattggaacatttcccg gatgccgcgctcagcggaatcaacgacgtcctgggcgcatatatccagtacgcgaaggtc gtaccagaagcgtgctatctgtctcaagccctcgcgcgctgtctcaccgacatcatcgag gcgctgtgttccagcccctctggcctcctcctccagtcctcatacgtcaagacggcggcg tctacgctcgaggacaagataccgaagtggtggcacgcgatgacggaggcgctctgcgtc atcttcgcgtacacgccccgctgggcgcgtttcttcgagaacgaagagatggtactctgg atgcgggacgcgctcatcttcgggcgcgacctgctggcacagcgcaggatactggagacg ggcacgctcgcgcgctcgcagaagggggccggctcgagcgcaaagctgacgaacgtgggg aagaagatggtcgacgacctccagcaagtgctcttcgagctcacgaagtggctgcgcctc acggacgaggaactgctgcaccagtccttcgcgctcctggagacactgctcgagtgcttc cgccagaccgagacgcgcccgcgtgcagagacgttccagcgcatacagcggcacatcgac gacgcgcgaaagaacgacccgaaccgcatgaagtcgcgcctggactcgacgcgcttggtg cggctcgaagaggctgtcagcgcgttcgacgaggccgatgaggaaatccagataatctcc cacatcaagccgacgaagccgaagaagactgccaaagtcaaggaggaccagaaggcggcg cctaggcatatcctgaaggcgggcccgtcgaaggatatccagctaaaggacatcaatcgc aagggcaaggcgggcatctctagctatttctcgctcaacgatgagaagaaacctgtcgca gcctcctcggtttcccgctacggagtcccgtctgttagcggtcgctctcttccttccgcg ggtccttcgagggtgtccaagcctctcatcaaggacgagagatcatcggcaaaggcgaat tccacctcctcacgtgccacgtctccaagtagtagcgagaacgaacagagcgaggacgaa gaagacgagggcccgaagggtttggcggctttatcgaagttgcagcggacccccgcaatc aagcaacccacagagcgacggcaggtcaagatgcttgacatgcctttggaaggccgcggc atcaagttcgaccgactgcagaagcgcgacgacgcacgtcgtacccacatgcgcctgaag ccggacgtctctgggttacatcgcacgctgctctcgtggaactatgagcatttgggaccc gagcccccttgggacaggccgaagctactgccagtcccggatcgtttcagagactacgca cacttccgcagcgttttcgagcccatcctactcctcgagtgctggaatcaacttcaagaa tccaaggagactacgcaagagtccaacgatgtcagaatcaacaatcgccagtacaccgac cagtatatggacgtcgacatctcgttcgaaggcagcgtctcgaaggactggaacctctcg gatatggatatcgtactgttcacgcatcctggttccaaacgtcgggtcatggggaagacg caaaactaccgttcctcgtatatgggcatccaagctaccgtacgtttccttgttcagggt gccgacccagggttgcaagtaggtactgtgtggtctttgagcaaggtcttgagtttgtcg acactcatccgcgagtacgcctccctcatggcccttccgcactacgacctcctcgacagc gtccttcacgcacaactgtcgcaaccttcaagaaccgactccggggaggtacagaaggtc atgaccacgtacaaagtgaacgaacctcaagccaacgccatcatcaagtcgcttgccacc gagggattcgcactgattcagggacctccgggtaccggtaagacgtcgacgatttgtgga ctggttcaactgtacctcgcgcgacgtccaaagacgtcctcggtcatccatcctggccgc cccgccgagcgcgagcttcccaaaaagatcctgctttgcgcgcccagtaacgctgccatc gacgagattgcgtttcgtctgaaggaaggagtatcaggtgcgggacacagggcggagcat ccgaaggtggtgcggattggtgcgctcaagagcatgaacctgagcgtccgggacgtgtcc atggagtatctcatcgaccagaagctcaattctgatccggggttgaagaacaccaaggag gctggtaccgagctgtcccgggtgcggtctgagctcgaggccgtcaagcggcaacggcag gagaagatagaggagcttgctacgatccaagacaacgcttcgaaaacgctcgcactggag gaagatgtcaaacggttgaacaggcagaaggcgatgctgacccaccagctcgataaggtg aaggacaagcagaagtccgactaccgcacgctcgacgctactcgacgacggttccggaat gaggttcttcaggaggcggacgtgatttgcagcacgctctctgcttccgcatacgagtac ttggagtccttcgacttcgagctcgtgattatcgatgaagccgcccaggccattgagctg agctctctcattccgatgaaatacagatgtcggacgtgcatcatggttggagatcctcag cagctgcccccgacggtgaagtctcaggaggcgtgcaagctcggatacgaccagtcgctc ttcgtcaggctgcagaggagtcagccggaagcagtacatctactgagtatacaataccgt atgcaccccgatatcagccaactgcccagcaacttattctacggcggacgcctgctggac gggcctgatatggcggagaagaccaaacgagcatggcaaacgcacccgaaattcggcacc tatcgcttcttcaacgtgcaagctggcgtggaggaaagcggcgcgggacactcgctggtc aatcgcgccgaggctcaggtcgcagtagcgctctacaatcggctgtgcaaggagttctcg tccgccaacatggacttcaaagttggcgtcatttccatgtatcgcggtcagatcctggag ctgcggcgagcgttccaacagcgatttggggaggaagtcttgagcatggtcgacttcaac acggtcgatggcttccagggacaagagaaggacatcattatcttgtcttgtgtccgtgct ggaccgggcgtacagactgtcggtttcttgcgagatgtgcgtcgtatgaacgttgccctg acccgagcgaaagcatctctgttcgttcttggtaacgcccctacgctcgagcgcagtgac gagacttggcgaaagattgtggagaacgcgcgctcaaggtctagcctcgtcaacgtcgat gctgcatactttacggcgcccgtaaccgcagcacaaagcaagccgccttcgcagatcaaa caggccaagcccgcgtcgaagcctccgtcaaatatcacacctgccgtcccagatgatctc gttactccccgcgagctcaaggcgcttgcgaaccgtcccaacggcaatgcctcgtctccg actggcgctcccacgtcgcgcaaggcgtccgtcgcgggaccatcaaccgcagtgtctaca gaagatgcacaagtgggacagaagcgaaaggcggaggagacaccaaaggaagaagcagcg cgtccaaacggtgcccccgggccaggaccgaaaccgcgaccaaaacctcccttggtcaag cgtccaaaacagggcccgagtctgttcataccgaaaaagcgccctgctccatga

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