Trametes versicolor: TRAVEDRAFT_71735
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Entry
TRAVEDRAFT_71735 CDS
T04795
Name
(RefSeq) RNA-binding domain-containing protein
KO
K12876
RNA-binding protein 8A
Organism
tvs
Trametes versicolor
Pathway
tvs03013
Nucleocytoplasmic transport
tvs03015
mRNA surveillance pathway
tvs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRAVEDRAFT_71735
09122 Translation
03013 Nucleocytoplasmic transport
TRAVEDRAFT_71735
03015 mRNA surveillance pathway
TRAVEDRAFT_71735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvs03019
]
TRAVEDRAFT_71735
03041 Spliceosome [BR:
tvs03041
]
TRAVEDRAFT_71735
Messenger RNA biogenesis [BR:
tvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
TRAVEDRAFT_71735
Spliceosome [BR:
tvs03041
]
Complex C
Other components
EJC/TREX
TRAVEDRAFT_71735
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
19419498
NCBI-ProteinID:
XP_008037995
JGI:
71735
LinkDB
All DBs
Position
Unknown
AA seq
163 aa
AA seq
DB search
MSDDGMNIDDGGVVRRKGRGFQSAAGNESAVTSEQVFDRLDSTQTSETRAARSVEGWIVM
VTGVHEEATEEDVTDKFAEFGEIKNLHLNLDRRTGYVKGYALVEYETMADAQAAIDGASG
TQLLEQSIQCDFAFVRPPPAGPKKGRGREGRGRSASPSRRRGE
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgatggcatgaacatcgacgatggcggcgtcgtcagaaggaagggcagaggt
ttccagagcgccgcaggaaacgagagcgccgtcacctcggagcaagtcttcgaccgactc
gactccacgcagacctcagaaactcgcgctgcccgctccgtcgaaggatggattgtaatg
gtcaccggtgtgcacgaggaagccaccgaagaagacgtcacagacaagtttgcggaattt
ggtgagatcaaaaacctccacctgaacctggacaggcgaacgggatatgtcaagggttac
gccctggtggagtacgaaacgatggccgacgctcaggctgcaatagacggcgcatccggg
acccagctcctggaacagagcatccaatgcgacttcgcgtttgtcaggcccccgcccgca
gggccgaagaagggtcgcggacgcgagggtcggggtcggagcgccagcccatctcgtcgg
aggggagagtag
DBGET
integrated database retrieval system
