Trametes versicolor: TRAVEDRAFT_72423
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Entry
TRAVEDRAFT_72423 CDS
T04795
Name
(RefSeq) DEAD-domain-containing protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
tvs
Trametes versicolor
Pathway
tvs03013
Nucleocytoplasmic transport
tvs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TRAVEDRAFT_72423
03015 mRNA surveillance pathway
TRAVEDRAFT_72423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvs03019
]
TRAVEDRAFT_72423
Enzymes [BR:
tvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TRAVEDRAFT_72423
Messenger RNA biogenesis [BR:
tvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
TRAVEDRAFT_72423
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
19419623
NCBI-ProteinID:
XP_008039523
JGI:
72423
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MEKDADGFYTPAPAAAPAEAPAPATEDAPEGAGSPKPDAVTDLIKSTFEVAVTLADQQAD
PNSPLFSAKTFEELGLHQDLLKGIYDMGFSKPSKIQERALPLLLSNPPQNMIGQSQSGTG
KTAAFVLTMLSRVDFSINKPQALCLAPSRELARQIMSVVVAMGKFTSVQTEYAIKENLPK
GASKVTAQVIVGTPGTMTDLIRRKVIDVAEVKVFVLDEADNMLDKDGLGEQTLRVKNMLP
KSHPVQIILFSATFPDHVRNFASKFAPNANKIELKRNELSVDNIRQFYMDCRNEEHKYEV
LVSLYSLLTIGQSIIFCQHRHTADRISQRMTAEGHKVASLHGAKDAAERDAIIDNFRDGK
EKVLITTNVIARGIDILQVNMVVNYDLPLMNERGEREHHAPREDARPDIETYIHRIGRTG
RFGRKGISINFVHDKATWQQMEQIEKATGKQIVRIETNDLDAMEEQMKKALK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagacgccgacggattttacacgcctgctccagcagccgcgcccgcagaggca
ccggcacccgccactgaggatgcaccagagggtgcaggatccccaaagccagacgcagta
acggatctcatcaagtcgacgttcgaggtcgcggttacgctcgcggatcagcaagcggat
cccaactcgccgctctttagcgcgaagaccttcgaggagcttgggctgcaccaggatctt
ctcaagggcatctacgacatgggtttctcgaagccgtccaagatccaggagcgcgcactg
cccctcttgttgtcgaatcctccacagaacatgatcgggcagtcgcagtcaggcacgggg
aagacggcggcgttcgtgctcacgatgctcagccgcgtcgacttctccattaacaagccg
caggcactgtgcctcgcgccgtcgcgcgagctcgcgcggcagattatgtccgtggtcgtg
gcgatgggcaagttcacgtcggtgcagacggagtacgcgatcaaggagaacctgccgaag
ggcgcgagcaaggtcacggcgcaggtcatcgtgggcaccccagggacgatgacggacctc
atccggcgcaaggtgatcgatgtcgcggaggtgaaggtgttcgtgctcgacgaggcggac
aacatgctcgacaaggacgggctcggcgagcagacgctccgtgtgaaaaacatgctcccg
aagagccacccggtgcagatcatcctgttctcggcgacgttcccggaccacgtgcgcaac
tttgcgagcaagtttgcgccgaacgcgaacaagatcgagctgaagcgcaacgagctctcg
gtcgacaacatccggcagttctacatggactgccggaacgaggagcacaagtacgaggtg
ctggtgtcgctgtacagcctgttgacgatcggccagagtatcatcttctgtcagcatcga
cacacggcggaccgcatttcgcagcggatgacggcggagggacacaaggtcgcgtcgctg
cacggggccaaggacgcggctgagcgcgacgcgatcatcgacaacttccgggacggcaag
gagaaggtgctgatcacgacgaacgtcatcgcgcgcgggatcgacatcctgcaggtgaac
atggtcgtcaactacgacctgccgctgatgaacgagcgcggggagcgcgagcaccacgcg
ccgcgggaggacgcgcggccagacattgagacgtacatccacagaattgggcgcacgggg
cggttcgggcgcaagggcatctcgatcaacttcgtgcacgacaaggcgacctggcagcag
atggagcagatcgagaaggcgacgggcaagcagatcgtccgcatcgagacaaacgacctc
gacgcgatggaagagcaaatgaagaaggcgctgaagtaa
DBGET
integrated database retrieval system
