KEGG   Trametes versicolor: TRAVEDRAFT_72490
Entry
TRAVEDRAFT_72490  CDS       T04795                                 
Name
(RefSeq) proteasome regulatory particle lid subunit SEM1
  KO
K10881  26 proteasome complex subunit DSS1
Organism
tvs  Trametes versicolor
Pathway
tvs03050  Proteasome
tvs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tvs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    TRAVEDRAFT_72490
  09124 Replication and repair
   03440 Homologous recombination
    TRAVEDRAFT_72490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tvs03019]
    TRAVEDRAFT_72490
   04131 Membrane trafficking [BR:tvs04131]
    TRAVEDRAFT_72490
   03051 Proteasome [BR:tvs03051]
    TRAVEDRAFT_72490
   03400 DNA repair and recombination proteins [BR:tvs03400]
    TRAVEDRAFT_72490
Messenger RNA biogenesis [BR:tvs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     TRAVEDRAFT_72490
Membrane trafficking [BR:tvs04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    TRAVEDRAFT_72490
Proteasome [BR:tvs03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     TRAVEDRAFT_72490
DNA repair and recombination proteins [BR:tvs03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     TRAVEDRAFT_72490
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 19419632
NCBI-ProteinID: XP_008039584
JGI: 72490
LinkDB
Position
Unknown
AA seq 109 aa
MSAAAASTSQPVQGTSAAVEHTKDDDVPHLGVLEEDDEFEEFAVADWDDSQTDLAHLAGT
APGAAKSGGDKLWEDNWDDDDIEDDFSVQLRNELAKKKGNGGGAEAMQH
NT seq 330 nt   +upstreamnt  +downstreamnt
atgtctgctgctgctgcgtcaacatctcagcccgtacagggcacttctgctgcagtcgaa
cacacaaaagatgacgacgtcccgcacctcggcgtgctagaggaggatgatgaattcgag
gagttcgcggtagcagactgggacgactcacaaacggaccttgcgcatttggccggtacg
gcacccggcgcggcgaagtcgggcggggacaagctgtgggaggacaactgggacgacgac
gacatcgaagatgatttcagcgtgcagctaaggaacgagcttgcgaagaagaagggcaat
ggcggcggcgccgaggcaatgcaacactga

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