Trametes versicolor: TRAVEDRAFT_72517
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Entry
TRAVEDRAFT_72517 CDS
T04795
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K10756
replication factor C subunit 3/5
Organism
tvs
Trametes versicolor
Pathway
tvs03030
DNA replication
tvs03410
Base excision repair
tvs03420
Nucleotide excision repair
tvs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TRAVEDRAFT_72517
03410 Base excision repair
TRAVEDRAFT_72517
03420 Nucleotide excision repair
TRAVEDRAFT_72517
03430 Mismatch repair
TRAVEDRAFT_72517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvs03032
]
TRAVEDRAFT_72517
03036 Chromosome and associated proteins [BR:
tvs03036
]
TRAVEDRAFT_72517
03400 DNA repair and recombination proteins [BR:
tvs03400
]
TRAVEDRAFT_72517
DNA replication proteins [BR:
tvs03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
TRAVEDRAFT_72517
DNA Replication Termination Factors
ELG1-RFC complex
TRAVEDRAFT_72517
Chromosome and associated proteins [BR:
tvs03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
TRAVEDRAFT_72517
DNA repair and recombination proteins [BR:
tvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
TRAVEDRAFT_72517
Check point factors
HRAD17(Rad24)-RFC complex
TRAVEDRAFT_72517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
AAA_22
Rad17
AAA_16
Mg_chelatase
Methyltransf_31
AAA_5
ABC_tran
Motif
Other DBs
NCBI-GeneID:
19419636
NCBI-ProteinID:
XP_008039612
JGI:
72517
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MSLWVDKWRPRSLDDLHYHHGLSDRLKALAASGDFPHMLFYGPSGAGKKTRIAGTLLELF
GKGAEKIKIDQRVFTTPTKRKLDVNIVQSNYHIEFTPSEVGNYDRLIIQDILKEIAQTQQ
VDLNAKQKFKVVVIHEADALTRDAQAALRRTMEKYMSNMRLILCANSTSKLIAPIRSRCL
LMRVAAPSTEEMQTVLDFVAKHEGFAIPEDTVSLIAADAGGNLRKAILVLEALKMQNPDL
SVSALSIAKPDWETYCHKVADMIVQEQSPARVMEVRAKLYELLSHCIPPTIVLKTIADRV
VEQVDEALKADIMHWAAIYEARMRIGNKKIFHLEAWVVKVMSLYKHFFYDIDMDGFDE
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtctctctgggtggacaagtggcgacctcgttcgctcgacgacctccactaccaccat
ggcctctccgaccgtctcaaagctctcgctgcatcgggagactttccccacatgctcttc
tacggtccatcaggcgcgggaaagaagacacgcatagcgggtaccctccttgagctcttc
ggcaagggcgcagagaagatcaaaatcgaccagcgtgtgttcacgacccccaccaagcgc
aagcttgacgtgaacatcgtgcagagcaattatcacattgaattcaccccgagcgaagta
ggcaactatgacaggttgatcatccaggatatcctgaaggagatcgcacaaacgcaacaa
gtcgatctcaatgcaaagcagaagttcaaagtcgtggtcatccacgaagccgacgcgctc
acccgcgacgcccaagcagcgctccgccgcacgatggagaagtacatgtccaacatgcgc
ctcatcctctgcgccaacagcacaagcaagctcatcgcgcccatccgctcccgttgcctt
ctcatgcgcgtcgctgcgcccagcacggaggagatgcagacggtgctcgacttcgtcgcg
aagcacgagggcttcgcgatccccgaggacaccgtgtcgctcatcgccgcggacgcgggc
gggaacctccgcaaggccatcctcgtcctcgaggccctcaagatgcaaaacccggacctg
tccgtgagcgcgctgagcatcgcgaagccggactgggagacgtactgccacaaggtcgcg
gacatgatcgtgcaggagcagtcgcctgcgcgggtcatggaggtgcgcgcgaagctgtac
gagctccttagccactgtataccgccaactatcgtcctcaagacgattgcggaccgggtg
gttgagcaggtggacgaggcgctgaaggcggacatcatgcactgggctgcgatatacgag
gcacggatgcgcattggcaacaagaagatcttccacctcgaggcgtgggtcgtcaaggtc
atgagcctgtacaagcacttcttctatgacatcgatatggatggcttcgacgagtga
DBGET
integrated database retrieval system
