Trametes versicolor: TRAVEDRAFT_73081
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Entry
TRAVEDRAFT_73081 CDS
T04795
Name
(RefSeq) snoRNA-binding rRNA-processing protein UTP10
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
tvs
Trametes versicolor
Pathway
tvs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TRAVEDRAFT_73081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tvs03009
]
TRAVEDRAFT_73081
Ribosome biogenesis [BR:
tvs03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
TRAVEDRAFT_73081
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BP28CT
HEAT_HEATR1
U3snoRNP10
HEAT
HEAT_2
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
19419718
NCBI-ProteinID:
XP_008040548
JGI:
73081
LinkDB
All DBs
Position
Unknown
AA seq
2081 aa
AA seq
DB search
MVSSLAEQLAKSASLNANLLNEKARKLVQSESYLFSPKEARQHDLESLHALGVNGFLQLR
SLQPTIAPFEQQLFSDAAKALDRTLQSAEQNAKLDAAITAFLPLLGPFLLDAPTGKVLEW
LVRRFRIHEFNVDAIVSLFLPYHETPHFIKMVSILNIKDRSPLRFLQAYKTTATPLHRSL
LITEMLKTLEVARFVSRILPTTLQSHCAGIHRALIAFHTGLLLEFVARSKALDENAMAVL
LPAALEPLQTASNPDAAVKPTLLQESILGSYLVLAAISQKTHLTANAVKSILVAVAECAE
RVLPKQLVRTLVSVCAPQEQLDRMSSSVIKTLVAIPNIESELISAMAWVGAEKLLIPLLD
SLLTQPDDFDAFGIVEAVVTSPVLISVIARSTASTLIQQFSEDEDAVTDVSSKIRQLLSH
LHQRHPKAVEAASALIIEEDDSKTDAVEQLILSLSVSAAGPSSVDTEAATLLVGSTNADS
AIRTRSVRDLLARLSNDTPAEAELRSISSALLLRIQDTDASVLNALYTSAPEVALRVFLA
ATPSPAGYLDALKQALHGSSAKPSRDVIRAHLSFLLTRFLPAFIARGQDAEASRETLRHA
SVDILLPFLLYTKPRMKTAQAVWEILQAAEDAGTDPAIFELLGGCVEAVRWEQQRAGLDA
KEKSGDKESINVGLLTKINIAVAAKIADNIIASNYYQQHLDSLLAKLRDDNHHARALVYL
VARVLLSRVGGEQRVDTAYRVLHAMQLETLEGMGDFMRGIDDVAVYLSDTSVGTAVALKP
SSLNTLHRLQVALLSVFPNISRPNGARMDWLAEYSGSTAGAPAARYVTVLRDVYRLSNSS
AHLAVLSTHLLCMLFANLGDDALAFLTGVWLNAGSQDEDAQSHIQYAALKHAAAFLEAHV
VTQRTIDFQTVFPAMLVMLQSPDASVREAVARCIAVVVRLSSEKEAEAVYAFDAIYGADS
AKLQYLDWTDFQRYVYAIGETRANLEHDPDYLQTFHKGHLSHSKTDTKKNAGYRQRVLCY
LLSHVNSCPLPSVKVALLRSLDSVSNEVKAQILMPTIEGLISEQGLQDVAAVKAYQDLAT
YAVSAFDASATADINDQEKPVWALYEKVLLASLRNGNWERPRAALLHRLQHGLFVKLSVE
RKVQLCQSLLRAAVENETSGLVCKKLLASMLTDVSLIIRLLVALQPSGEDTTQPATKRAR
VEKSATSAQTEEIAALAALAEVLSSVQIVGSLELVSCLLETLSKVTHTVAPDAADKRYVE
QLIMSAVENVVQQFPAATIVPPGSIRVDTLVEILRTSENPQSFHQASLLMASLARIAPDA
VLHNVMPIFTFMGSNVFHRDDTYSFQVVQKTVDSIVPVMVASLKEKHGTGMDLYRAAREF
LRVFTSAANHIPRHRRVNFFSHLVDTLGPADFLAPVTMLLVDRVANRVARQTSTESSGSL
FLPLAVCERYPAALQLPLFVELAHEVERLARPDGSSAPPFLEDAPDDEHPHAETSSKRRA
AALLVFSDHALRRLHVTALATSQQERASSKTLLALLLAVSTSHAGDASYAEVTAAARSAM
NSTLGIMSAPDFVEGILTILHSSSPSVQAAALELLSDRLTDVADKARRTLTPTVVQIVDN
IRSVLTGAEDALARSALRALSIISDTLSPGEESSITNTVPLILESVQRESVRAPALHALL
SFSSKLGPRAIPYLKGIVKECVARAREAAVSGGDSTLVATAAQVLRNLLTSIPTFWGEAE
VLQVVELYLDGSEASAAQSTEMSLLVKTVAKRASPTVLLPALCNMWERTLAAQAQNRAGR
VVAFVQVVKVSVKAASRPAVLENLRELFKAFLSMFDICATHQDADVESNITSAFLEVVVK
LNETAFRPIFRKMFDWAFNQSHDNRRVVFCHVYSTLLDFFKALMVPYMSFTWQSFTELLR
SYTSPVAVDGQLWLALIQTLSKAMSADEDKVFWRSDKLRLLAPLAAQQVPVAVRVNLPDG
KDALADFLEALLGILDDDVLTKSLNLDILMHSRSEDARVRLLSVTCAEQLWRAHGEKLLG
FVAETATFIAEAAEDDNDLVVQEAHRLKAAVEAIGGSIDVS
NT seq
6246 nt
NT seq
+upstream
nt +downstream
nt
atggtctcttctttggccgagcagctcgccaagagcgcgtcgctgaacgcgaacctgctc
aacgaaaaggcccgcaagttagtccagtccgagtcctacctcttctccccgaaggaggcg
aggcaacacgacctcgagtctctccacgcgctaggggtcaacggctttctccagctcagg
tctctgcagccgactatcgcgccgttcgagcagcagcttttctcggacgccgcgaaagct
ttggacaggacgctgcagtctgcggagcaaaatgcgaagctcgatgcggctattactgcg
ttcttgccgctgctggggccgttcttgctagacgcgccaacggggaaggttttggagtgg
cttgtgcgtagattcaggatacacgagttcaatgtagacgctattgtgtccttgttcctg
ccataccacgagacaccgcatttcatcaaaatggtgtccatcttgaacatcaaagaccgc
tcccccctccggttcctacaagcatacaagaccaccgccacgcctcttcaccgctctctc
ctcatcacggagatgctcaaaacgctggaagtggcacgcttcgtgtcccgcatcctccct
actactctgcaaagccactgtgcgggtattcatcgtgctctgatcgcattccacactggc
ctgctgctagagtttgtagccaggagtaaggcactcgatgaaaatgcgatggcagtcctt
ctgcccgcagcgttggagcctcttcagactgcgagcaacccggacgcagcggtgaaacct
acacttctgcaggagtctatactcgggagttatctcgttctggcagccatttcgcagaag
acgcacctcactgccaacgctgtgaagtctattctggttgcagtcgcggaatgtgcggag
cgtgtcttgccgaagcagctggtccggacactggtctctgtctgcgcgccacaagagcag
ctcgatcgtatgtcgagcagtgtcatcaagaccctggtcgctatccccaacatcgagtct
gaactgatcagtgcaatggcatgggtcggagcagaaaagctcctcattccgctgctcgac
agtctcctgactcagcctgacgactttgatgctttcggtatcgtggaggccgtagtcaca
tcgcccgtccttatcagcgttattgcacgctctactgcttcaacactcatccagcaattc
tcggaggacgaggatgcggttactgatgtgtcctccaaaatacgtcagctgctctcgcat
ctccaccagcgccatccgaaagcggtggaagcggcttctgctctcattatcgaggaagac
gactccaagactgatgcggttgaacagcttatcctctccttgtccgtctccgcagcgggg
ccttccagcgttgataccgaggctgctaccttgctcgttggatccaccaatgcggattcc
gccatccgtacacgttcagtgcgggatctcttggcacgtctatccaatgatacaccggca
gaggcagagctgcggtctatttcttcagcgctcttgcttcgcatacaggacacagacgct
tccgttctgaatgcgctctacacgagtgctccagaggttgctctcagggtgtttctcgct
gccacaccgtcaccggcaggctatcttgacgcactgaagcaagccttgcacggatccagc
gcgaagccatctcgcgatgtcattcgtgcccacctctctttcctgctcacccgtttcctg
cccgcattcattgcccgggggcaagatgcggaggctagccgcgaaaccttgcggcacgct
tcggtcgacattctccttccctttctcctctacacgaaaccacggatgaagaccgcacag
gccgtgtgggagattctacaagcagctgaggacgctgggaccgatccagcgatattcgag
cttctcggtggatgcgtggaagctgtccggtgggaacagcagcgtgctgggttggacgcg
aaagagaagagcggcgacaaggagagcatcaacgtgggcctcctgaccaagatcaacatc
gcagtggctgcgaagatcgcagacaatatcattgcctcgaactactatcagcagcatctg
gacagcttgctcgcgaagctgcgcgacgacaaccaccatgcacgcgcccttgtttacctg
gttgctcgagtgctacttagtcgtgtaggaggcgaacagcgcgtggacactgcatatcgc
gtcctacatgcaatgcagctcgagacattggagggtatgggagacttcatgcgcggcatc
gacgacgtcgcagtttatctgagcgacaccagcgtgggaactgccgtggcgctcaagcca
agcagcttgaacacccttcatcgtctgcaagtcgcattgctttcggtgttccccaacatt
tctcgtccgaatggtgcgcgtatggactggttggcggagtactcgggttcgacggccggc
gcaccggcagcgcgctatgtgacagttctacgggatgtataccgcctgagcaactcgtcg
gcacacctcgcggttctctccacccatctcctctgcatgctcttcgccaacctcggcgac
gacgccctcgcgttcctcactggcgtgtggctcaacgccggttcccaggacgaggacgcg
cagtcgcacatccagtatgcggctctcaagcacgcggcagccttcctcgaagcgcatgtc
gtaacacagcgcacgattgacttccagactgtgttccccgcgatgctcgtcatgctacag
agccctgacgcgagtgtgcgcgaggctgtcgcgcgctgcatcgcggttgttgtcaggctc
tcttcggagaaggaggcagaggcggtttacgcattcgacgctatctacggtgcagactcc
gccaaactgcagtacctcgattggacggacttccaacgctatgtctacgcgattggggag
accagggcaaacttggagcacgatcctgattacctgcagacgttccacaaggggcacctt
agccactcgaagactgacaccaagaagaacgctggctacaggcagcgcgtgctgtgctac
cttttatcccacgtcaacagctgtccgcttcccagtgtcaaggtcgctttgttgcgaagc
cttgacagcgtctcgaacgaagtgaaggcgcagatattgatgccgaccatcgaaggccta
atcagtgagcaaggattgcaagatgttgcagctgtcaaagcctaccaagacctggcgacc
tacgctgtgtccgcgttcgatgcgtcagcgaccgccgatatcaacgaccaggaaaagcct
gtttgggctctttacgagaaggtgttgctcgcgtcactcagaaatggtaactgggaacgg
cctcgcgcagcattactccaccgcttgcaacacggcttgtttgtcaagctctctgtagag
cgcaaggtgcagctttgccaaagcctactgcgtgccgcagtcgagaatgagacctcgggc
ctcgtctgcaagaagcttcttgcaagcatgttgacggacgtgtctctcatcatccgcttg
cttgtcgcactccagccgagcggtgaggatacgacgcaacccgcaacaaaacgggctcgt
gttgagaaatctgctactagtgcgcagactgaagagatcgcagcacttgctgcccttgcg
gaagtcctgagttccgtccagatcgtcggctccctggagcttgtgtcttgcctgctcgag
acactcagcaaggtcacgcacaccgttgcacccgacgctgcagataagcgatatgtcgag
cagctcatcatgtccgcagtcgagaacgtggtacaacaattcccggcggcgaccattgtc
cctccgggttcgatccgtgtagacaccctcgtcgaaatcctccgcacatcggagaacccg
cagtccttccaccaggcgtcgttactcatggcaagccttgcccggatcgcaccggatgcc
gtactgcacaacgtcatgccgatcttcacgttcatgggctcaaacgtctttcaccgagac
gatacctacagcttccaagtggtacagaagactgtcgacagcattgtgccggtcatggtt
gcctcgctcaaggagaagcacgggacaggaatggatctctatcgtgccgcccgagaattc
ctgcgtgtgttcacaagcgctgcgaaccacatcccccgccatcggcgcgtcaacttcttc
tcacatctcgtggacaccctcggtcctgcggatttcctcgcccccgtcaccatgctcttg
gtcgaccgtgtagccaatcgtgtggcacgccagacctccactgaatcctccgggtccctc
ttcctccctctcgcagtgtgcgagcgttatcctgctgcacttcagcttcctctctttgtc
gagctcgcacacgaagtggagagacttgcgcggcctgatggctcatccgccccgccgttc
ttagaggatgccccggacgatgagcatccgcacgctgagacgtcgtctaagcgtcgggcg
gctgctcttcttgtgttctctgaccacgctttacggcgtctccatgttactgctcttgcc
acgtctcagcaggaacgcgcatccagcaagacattgctggctctgctactcgctgtttcc
acctcccatgcaggcgacgctagctacgcagaggtcaccgccgcggctcgctccgccatg
aatagcactctgggcattatgtctgcacctgacttcgttgagggtatcctcaccatcctc
cactcctcgtcaccaagtgttcaagctgccgcactagagctgctcagtgatcgtctgacc
gatgtcgcggataaggctcgtcgcaccctcactccaacagtcgtccaaattgtggacaat
attcgctcggtccttactggtgcagaggacgctcttgcgcggtctgccttgcgcgctctc
tctatcatcagcgacacgctttctcctggcgaggagagttcgatcacaaacacagttccg
ctcatcttagagtccgtgcagcgcgagagcgtgcgggctccggcattgcacgcgctgctc
tctttctcctctaagctggggccgcgggccatcccgtacctcaagggcatcgtcaaagag
tgtgtcgcgcgagctcgggaagcagcagtatccggcggagactccacgctcgtcgccact
gcagcgcaagttctgcgcaacctcctcacctccattcctacgttctggggtgaggcagag
gtgctccaggtcgtcgagctctacctggacggttccgaagcctccgcggcccagtccact
gagatgtcgctgctggtcaagaccgttgcaaagcgcgcatcccccaccgttctgcttcct
gccctctgcaacatgtgggaacggacgctcgctgctcaggcccaaaatcgtgccggaagg
gttgtagcgttcgtccaggttgtcaaggtgtccgtcaaagcggcatcacgacctgccgtc
ttggagaacctgcgcgaactgttcaaggccttcctctctatgttcgatatctgcgcaact
catcaggatgcagatgtggaaagcaatatcacctcagcgttcttggaggtcgttgtgaag
ctgaacgagaccgccttccgacccatcttccgcaagatgtttgactgggccttcaaccaa
tctcacgacaaccgacgagttgtattctgccatgtgtattccactttgctcgacttcttc
aaggcgctcatggtcccgtacatgtccttcacgtggcaatccttcaccgagctccttcgc
agctacacctcgcccgtggccgtagacgggcagctttggttggcccttattcagacgctc
tcgaaggcgatgtccgccgacgaggacaaagtcttctggcgcagcgacaagcttcgacta
ctcgcgcccttggccgctcaacaggttcccgtggctgtgcgcgtgaacctaccggacggc
aaggacgccctcgcagatttcctcgaagctctgctgggtatcctcgatgacgatgtgctg
acaaaatcgctcaacctcgacattctcatgcacagccgctccgaggatgcgcgggtgcgg
ctgctgagcgtcacctgtgcagagcagttgtggcgcgctcacggcgagaagctgcttggc
ttcgtggcggagaccgctacattcattgctgaagctgcggaagacgacaacgacttggtc
gtccaggaggcccacaggctcaaggcagccgttgaggccattggcggaagtatcgatgta
tcataa
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