Trametes versicolor: TRAVEDRAFT_74330
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Entry
TRAVEDRAFT_74330 CDS
T04795
Name
(RefSeq) chromatin-remodeling protein SWR1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
tvs
Trametes versicolor
Pathway
tvs03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TRAVEDRAFT_74330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvs03036
]
TRAVEDRAFT_74330
Chromosome and associated proteins [BR:
tvs03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
TRAVEDRAFT_74330
SWR1 complex
TRAVEDRAFT_74330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
19419942
NCBI-ProteinID:
XP_008042986
JGI:
74330
LinkDB
All DBs
Position
Unknown
AA seq
1629 aa
AA seq
DB search
MSARRKFQHSETPATSSTPSRKQDPTVPGDGGEDVIECVRTQWVQDRREELDRVFDTHDT
LIREAFHLEKFVSLLTYDPKAAKEDRSDVFQRYQAQYDLVDHNASSGPSRRTTRRAHTER
LQTLKVPTVTAPPPTQKKARKTEEKLGVAFWDLKAEAKSKGKQVHANGQDAASSPVGPPR
KGKGKQPVVEILVPRPSVRRAKSPVLANYSDHEPESASTSHAPAHGLAPPPPRKKRRLTH
HASTADLSGRTSTRQSLRSAASVPDLSSAVSYDHHGEVSSSAVNGVSSMGPPAEPPPSPT
KSTIPRIKLIVRRPAPVYTHPLQRPKPTPFGGSIETLLNSFTFRLHDEVNAEQVDEEVEA
ELKVWRRVDKLRKEGRMVGERSSFEYKPADANDAWGHIVHEIERPGAKLVNTRRGAANVA
GKVKGHWTGESDRERKRLRVLARTTLEIVIEEWKKAVYHIREQERLEREEEQRKLGQQHL
DAILDQSGQILETQLLDLARDGDHGSRSRSRSVSTPGADWHAASGDDRSDATEVSDDEIA
SESSEVSDTLGVDEGISMLLTEDARAGLVTESPRSSSIEASTATPVLVDDEESGDEVFTE
VQPKPSDLLTDVVDYASSSDPGSPRHLIDDSLSSPTRSPNAVNGVLRSPTLMYASKGPIS
MDIDDSQDLFADVAALPFADVTLPPPLNGHVTNGFSDLHDTLASENGTSPDVPGDDESSA
SLDASLHVTQTLSTPLNGKKNHITVEIPQTPLEDATPFTPATPAVDDLPEEIDDDIEEDS
SIPYYLRPYAVAPVEWDPQAKVKPPQLLRGTLRPYQQAGLEWLASIHARNLNGILADEMG
LGKTIQTIALLAHLACDRGIWGPHLIIVPTSVLLNWEMEFKKFLPGFNVLSYHGNTKQRK
ELRQGWNNKYHFNVCITSYTLASRDAHVFKRKRWYYMILDEAHMIKNFKSQRWNILLMFR
SFRRLLLTGTPLQNNLTELWALLQFLMSGTDFANLKEFGEWFANPLEKAIELGAVDDEVQ
QRVSKLHTVLRPYLLRRLKRDVEKELPQKYEHLVMCPLSKRQRFLYDEFMARADTRYDLQ
SGVYQKIANILMQLRKVVNHPDLFEVRPIVTSFAMQRSAIADFEIKELLVRRRLLVESDE
DRVNLDLLGLKFIDNLGQSEIAVRETRRLDATAYLPMISEVPGEPPPVDTRTIAGWRKHR
AYQERAETIARWTHIAYLNRLRTNQATIYSADTLALVGRFYQPLLPYDVSTRPTQYLSTP
ERVRTAIKSFAARAEEMSSIIDRFTFATPAVVARDLPSIALAGVPEGVVESVNSPQFDAT
LHRAAVKLQIAFPDPSLLQFDCGKLQMLANLLRERRAGGHRVLIFTQMTRILDILEIFLN
LHGYLYLRLDGATKIEDRQYITERFNSDPRVFCFISSSRSGGVGINLTGADTVIFYDSDF
NPQMDRQCEDRAHRIGQIRDVHIYRFISQHTVEEALLRKANQKRSLDDLVIQRGAFDWRT
LLVTDDADALTRALGEFEDREDAEAAQIAAREERMLESEDAQDFEVDAAAGEGRKTPVER
RASEPDLLGEVREADAEVVVGEENAAAGSEPAEPEEGEEEEEEEEGRTTVDYMLDFIRLD
WEHFGGWNV
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcccggcgcaaattccagcactctgagactccggcgacgtcttctacaccctcg
aggaagcaagatcccaccgtacccggagatggcggagaagacgtgatcgagtgcgtccgc
acgcaatgggtacaggatcggcgcgaggagttggacagggtgtttgatactcatgatacc
ctcatccgcgaggcctttcatctggagaagtttgtgtcgctgctcacctatgacccaaag
gctgccaaagaggatcgatccgacgtattccagcggtatcaagcgcaatacgatctcgtt
gaccacaatgcctcctccggcccctcccgacgtacgacccggcgtgctcacacggaacgc
ctacaaaccttgaaagtgcctaccgtcaccgcgcccccgcctactcagaagaaagcccgc
aaaacggaggagaagttgggtgtcgccttctgggacctcaaggctgaggcaaagtccaag
gggaagcaagtacatgccaacggtcaagacgccgcgtcctctcctgttggtccgcctcgc
aaggggaagggcaagcagcctgttgtggaaattcttgtcccccggccctcagtgcgccga
gcaaaatctccagttcttgccaattatagtgaccacgagccagaatcagctagcacatct
catgcccccgcccacggacttgcgccgccaccgccacgcaagaaacggcgcctcacgcac
cacgccagcaccgctgatctttctggacgcacctccacccgccagtctctcagatctgct
gcctctgtgcccgatctctcttctgccgtgtcttacgaccaccatggcgaggtgtcttcc
agcgcagtgaacggagtctcttcaatgggaccgcccgcggaaccccctccgtcccctaca
aagtcgaccataccgcgcataaaacttatcgtgcggaggcccgcgcccgtgtacacgcac
cctttacaacggccaaagcctactccgtttggcggatctatagaaacccttctaaactcg
tttacattccgtctgcacgacgaggtcaatgccgagcaggtcgacgaggaagtcgaagcc
gagctgaaggtctggcgacgcgtcgataagctgcggaaggaggggcggatggtcggagag
cgttcgtcgtttgagtacaagccagcggacgcaaatgatgcctggggccacattgtacac
gagatcgagcggcccggcgcgaagctggtaaacacgcggcggggcgcggcgaacgtggcg
ggcaaggtgaagggacattggaccggggagagcgacagggagcggaagcgcctcagggtg
ttggcgcgaacaacgctcgagatagttatagaagagtggaagaaggcggtgtatcatata
cgggaacaggaacgactggagagggaagaagagcagcggaagcttggacagcagcatctc
gatgccatcttggaccagtcaggccagatcctcgagacacagctgctcgacctcgcgagg
gatggggatcacggctcgcgcagccgctcccggagcgtatccactcctggcgcagattgg
cacgctgcatccggcgacgataggtctgatgctaccgaggtctctgatgacgaaatcgcg
agcgagtcgtcggaggtttccgacaccctcggtgtagatgaggggatcagcatgttgctg
actgaagatgcacgcgcaggactagtcaccgaatcgcctcgaagctcctctatagaggcg
agtacggcgacccccgttctagtggatgacgaggaaagcggcgacgaggtgttcacggag
gtacagccaaagccctcagaccttctcaccgacgttgtcgattatgccagcagcagcgac
cccggatccccacgacatctcatcgacgactctctcagcagcccgacccggtcgccaaat
gctgtgaatggagttctcaggtcgccgacgctcatgtatgcctcgaagggtccgatttcc
atggatatcgacgactcccaggatttatttgcagacgtcgccgcgctcccattcgccgat
gtcacgctgcccccgcctctcaacggtcacgttaccaacggctttagcgatctgcatgac
acccttgcgtccgagaatgggacatctcccgatgtaccaggtgacgacgagtcttccgca
tccctcgatgcgtctctgcatgttacgcagacacttagcacacctctgaacgggaagaag
aatcacatcaccgtcgagataccccaaacgcctctcgaagatgccacgccattcaccccc
gctactcccgccgtggacgacctgccagaggagatcgacgacgacatcgaagaggactcg
tccatcccgtactacctcaggccgtacgcggttgcgcccgtggagtgggatccgcaggcg
aaggtgaagccgccgcaactcctgcgtggcacgctgcggccgtatcaacaagccgggctc
gaatggctcgctagtatacacgcgcggaacctgaacggcatcctggccgacgagatggga
cttgggaagaccattcagaccatcgcgctcctcgcccacctggcgtgcgaccggggcatc
tggggcccgcatctgatcatcgtcccgacgagcgtgttgctgaactgggagatggagttc
aagaagttcttgcccgggttcaacgtgctcagctaccacgggaacacgaagcaacgcaag
gagctgcggcaggggtggaacaacaagtaccacttcaacgtgtgcatcacctcgtacaca
ctcgcaagccgcgacgcgcatgttttcaagcgcaagcggtggtactacatgatcctcgac
gaggcccatatgatcaagaacttcaagtcacagcggtggaacatcctgctgatgttccgc
tcgttccgtcgtctgctgctcactgggacgccgctgcagaacaacttgactgagctctgg
gcgctgctgcagttcttgatgtccggcaccgactttgctaacctgaaggagtttggggag
tggttcgcaaatcctctggagaaggcgattgaactcggcgcggtggacgatgaggttcag
cagcgcgtttcgaagctgcataccgttttgaggccgtatctactccgtcgcctcaagcgc
gacgtcgaaaaggagctgccccagaagtacgagcaccttgtcatgtgtccgctctcaaag
cgtcaacgcttcctctacgacgagttcatggcccgcgccgacacacgctatgacctccag
tcgggtgtctaccagaagatcgcgaacatcctcatgcaacttcggaaggttgtcaaccac
ccggacttgtttgaggtccgaccgatcgtcacctcgttcgccatgcagcgctctgccatt
gccgacttcgaaatcaaggagctgctcgtccgtcgacgtctcctggttgagtctgacgaa
gaccgcgtaaacctcgatctcctaggactgaagttcatcgacaacctaggccagtcggag
attgcagttcgggagacacgacgactggatgcgacagcgtacctgcccatgatctctgaa
gtgccgggagagccgcctccggtcgatacgcgtaccatcgcgggctggcggaagcacaga
gcataccaggagcgggccgagaccatcgcgcggtggacccatatcgcctacctcaatcgc
cttcggacgaatcaggccactatatacagcgcagacacccttgcactggtgggacgcttc
taccagccgctcctgccatacgacgtgtctactcgtccgacgcagtatctctctacccct
gagagggtgcgcacggcgatcaagtcatttgccgctagagctgaagagatgagctccatc
atcgaccggttcacgttcgcgactccagcagtcgtcgctcgagaccttccttccatcgct
ctggctggcgttcccgaaggcgttgttgagtccgtcaactccccccagttcgatgcgacc
ttgcaccgcgcggccgtcaagctgcagatcgctttcccggacccgtcactgttacagttc
gactgcggaaagctgcagatgctcgccaacctcctgcgcgagcgccgagcgggtggacac
cgcgtgctcatcttcacgcagatgacgcgaatcctcgacattttggagatcttcctgaac
ttgcatggctatctctacctccgcctggacggtgcgacgaagatcgaggaccggcagtac
ataacggaacgcttcaactcggacccgcgcgtgttctgtttcatctcgtcttcccgttct
gggggtgtcggcatcaacctgacaggagcggataccgtcatcttctatgacagcgacttc
aatcctcaaatggatcgtcaatgcgaggacagagcgcaccggatcgggcaaattcgcgac
gtacacatctaccgcttcatctcgcagcacacggtcgaagaagccctgctcagaaaggcg
aaccagaagcgctcgctcgacgacctcgtcatccagcgcggcgcgttcgactggcgcacg
ctcctcgtgaccgacgacgcggacgcgctcacgcgcgcgctgggcgagttcgaagatagg
gaggacgcggaggcggcgcagatcgcggcccgcgaggagcgcatgctcgagagcgaggac
gcgcaggacttcgaggtggacgctgccgctggggaggggaggaagacccctgtggagagg
cgggcgagcgagcctgatctcttaggagaggtgcgggaggcggacgcggaggtcgtggtt
ggggaagagaacgcggcagcggggagcgagcccgcagagcccgaggagggcgaggaggaa
gaggaggaagaggaggggcggacgacggttgactacatgctcgacttcatccgcctcgac
tgggagcattttggcggctggaatgtctga
DBGET
integrated database retrieval system
