Trametes versicolor: TRAVEDRAFT_75637
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Entry
TRAVEDRAFT_75637 CDS
T04795
Name
(RefSeq) Sec63-domain-containing protein
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
tvs
Trametes versicolor
Pathway
tvs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRAVEDRAFT_75637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvs03041
]
TRAVEDRAFT_75637
Enzymes [BR:
tvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
TRAVEDRAFT_75637
Spliceosome [BR:
tvs03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
TRAVEDRAFT_75637
Complex C
U5 SnRNP specific factors
TRAVEDRAFT_75637
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_22
PhoH
ASCC3_N
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
19420223
NCBI-ProteinID:
XP_008045470
JGI:
75637
UniProt:
R7S7K8
LinkDB
All DBs
Position
Unknown
AA seq
2165 aa
AA seq
DB search
MSGKRDLSGYNYAAISSLVLTADRSALPRRDKEPDGAPTSLVGRIDPREMGSRVQREAPK
DLDKKKKKAAERQEGADKPAKRRTADVTGFGYTDIIEATEDVEGLTYRPRTAETREVYEL
VLASVHQALGDQAQDVVRSAADMALEALKNENLKDFDKKKEVEEILGPVSNETFSQLINL
SKKITDYGVEDEKAADPDQEKKETELDDEMGVAVVFDEEEEEEEEDEGFEIREESDEEEE
ATEGAEPPPESLEGDDELVIGGSSAVGQGKAQVDKDVVSPHSIDAFWVQRQISEVYPDPV
TAADKASSVLSILGSESSVRDCENQLMELFDYQHFPIIRKFVKNRDVVVWCTKLMRSDAD
ERVNVEVAMREKGVGWILRELAGDRKTKTKTESMDVDAPPNIEAVPKTGTLAPGSIVQPK
AMVDLEGMAFSQGGHLMSNKKCKLPEGSFKRAKKGYEEIHVPAPKSKPTHDSELVLIESL
PEWAREGFKGYRNLNRIQSKLYPVAFGTDEPILLCAPTGAGKTNVAMLTILNELSKYRDE
ETGTFDLDSFKIVYIAPMKALVQEMVGNFSSRLAVYGIKVGELTGDSQMTKQQISETQII
VTTPEKWDVITRKSTDTSYTNLVRLIIIDEIHLLHDERGPVLESVIARTIRRMEQTNEYV
RLVGLSATLPNYQDVATFLRVDTTKGLFYFDASYRPCALQQQFIGVTEKKAIKRYQVMNE
VCYEKVLDQAGKNQTLVFVHSRKETAKTAKFIRDMAIEKETITQFVKPEGATREILLEES
NNVKDPNLKDLLQFGFGIHHAGMSREDRGLVEELFGDGHIQVLVCTATLAWGVNLPAHTV
IIKGTQIYNPEKGRWVELSSQDVLQMLGRAGRPQYDTYGEGVIITNHSELQYYLSLMNQQ
LPIESQFVAKLTDNLNAEIVLGTIRNRDEAVQWLGYTYLYVRMLKDPVLYSVGIDYSEGD
PTLVQKRADIVHTAAALLEKCHLIKYERSTGRFHSTELGRIASHYYVTYSSMATYNQHLR
PTMSMLELFRVFALSNEFKLIPVRQDEKLELGKLLERVPIPVKEAVEEPAAKINVLLQAY
VSQLKLEGFALVADMVYVQQSAGRIIRAIFEICLKRGWAVPAKAALDLCKMVERRMWGSM
TPLRQFKGVPSEIIRKAEAKQFPWYRYFDLSPPEIGELIGIQNAGRLVHRLVHNFPKLQL
QAQVQPITRTLLRIDLTIIPDFRWDEKVHGGSESFWILVEDVDGEIVLFHDTFILRQRYA
EDEHYVTLTVPMFEPVPPNYFISIVSDRWLHAETRLPISFKHLILPEKFPAPTPLLDLQA
LPLSALHNKDFESIYSSTIETFNKIQTQVFQALYTTDDNVFIGAPTGSGKTICAEFALLR
LWSKREQKRAVCIEPYQEMVDQRVEEWRKKFGSLQGGKEIVSLTGETSADLRLLEKGDLI
VCTPMQWDVLSRRWRQRKNVQNIGLLIADEVQLVGGEVGPTYEVVISRTRYVSAQTDIKT
RIVACGVSLANARDLGEWMGAPSHAIFNFPPSARPLDMDIHIQSFQIPHFPSLMIAMSKP
AYLAMCEYSPHKPVIIFVPSRRQCRLTADDIITHCSADDNPNRFLHVEEADLAPHLEHVT
DAGLKETLKHGIGYYHEALDKQDKRIVERLFQHGAIQVLIASKDTAWSLPVSSYLVIIMG
VQNYEGKEHRYVDYPVMDVLQMMGRACRPLEDEKSRAVLMCQQTRKDFYKKFLAEGLPIE
SHLPTHMLHDYFLAEIAVKTIENKQDAMDILTWTYFYRRMTQNPNYYNLHNVSHQHLSDH
LSELVESTLNDLVNSKCIAIEDEMDVSPLNLGMIAAYYNISYVTVEVYTLSLKERTKLKG
LLEVVSSSAEFESIPIRRHEDVLLRRIYDRVPVKLEKADFEAPHFKTFLLLQAHFSRLQL
PPDLAADQVLVLEKVLNLLSACVDVMSSNAWLNALGAMDLSQMCVQASWETDSPLKQIPH
FEPDVIKRCKEAGVETVYDIMEMEDDKRNGLLQMDARQMRDVATFVNSYPTLDVNYELAK
GEYTAGAPITIQISLSKDADEEMDVNEDDEVVVAPFYPKKKLANWWIVVGEPKTKQLLAI
KKVTVHRNLAVRLEFSLPQGEHALKLYVICDSYMGADHDIDLDPLEVAEGEDSDSEEESD
DAMEE
NT seq
6498 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcaaacgggacctgtccggctacaactatgctgccatctcttctctggtcctg
accgccgaccgctctgccttgcctcgacgcgacaaggagccggatggcgcgcccacgtct
ctcgtcgggcgcatcgacccgcgcgaaatgggctcgcgcgtgcagcgcgaggccccgaaa
gacctcgacaagaagaagaagaaggccgcggagcggcaggagggcgcggacaaacctgcg
aagcggagaacggcggacgtgacgggctttggctacacggacatcattgaggcgacggag
gacgtcgagggcctcacgtaccggccacgaaccgcggagacgcgcgaggtctacgagctc
gtgctcgcgagtgttcaccaggcccttggtgaccaggcgcaagatgttgttcgcagcgcg
gccgacatggcgctcgaggcgttgaagaacgagaacctgaaggacttcgacaagaagaag
gaggtcgaggaaattctggggcctgtctcgaacgagacattctcgcaactcattaacctg
tcgaagaagatcaccgactacggcgtcgaggatgagaaggctgccgacccggaccaggag
aagaaggagacggaactcgacgacgagatgggtgtcgcagtcgtcttcgacgaagaggaa
gaggaggaagaggaagatgagggcttcgagattcgcgaggagtctgacgaagaagaggag
gcgacggagggtgcggaaccaccacccgagtctctcgagggcgacgatgagctggttatc
ggtgggtcctcggcagtaggtcaagggaaagcgcaagtcgacaaggacgtcgtctcgcca
cattctatcgacgctttctgggtccaacgccaaatctcagaggtgtaccctgatcctgtt
actgccgccgacaaagcctcctccgtcctctcgattctcggttctgagtctagcgtccgc
gactgcgaaaaccagctcatggagctgtttgactaccagcacttccccatcatccgcaag
ttcgtcaagaaccgcgacgttgtcgtctggtgcacgaagctcatgcgtagtgacgcggac
gagcgcgtcaacgtggaagtcgcgatgcgggagaagggtgttggttggatcttgcgagag
ctagcgggcgaccggaagacaaagacgaagacagagtcgatggacgtcgacgcgccacca
aacatcgaggccgtgccgaagactggtacccttgcgcctggctcaatagtgcagccgaaa
gccatggtagacctagagggcatggcgttcagccagggcgggcacttgatgtcaaacaag
aagtgtaagctccctgaaggctcgttcaagcgcgcgaagaagggctacgaggagattcat
gttcctgctccgaagtcgaaacccacgcacgactctgagcttgttctcattgagtctcta
cctgaatgggcgcgcgagggtttcaagggctaccggaacctcaaccgcattcagagcaag
ctctacccggttgcgttcggcactgatgagcctattctgctgtgtgcaccgactggtgcc
ggtaagaccaacgtcgccatgctcaccatcttgaatgagctgtcgaagtaccgcgacgaa
gagaccggcaccttcgacctcgactctttcaagatcgtctacattgctcccatgaaggct
ttggtccaggagatggtcggcaacttcagctcgcgactggcggtttacggtatcaaggtc
ggcgagctcaccggtgactctcaaatgacgaagcagcaaatctcggagacgcagatcatc
gtcacgactccggagaagtgggatgtcatcacgcgcaagagcacggacacgagctatacg
aacctcgtacgtctcatcatcatcgacgagattcacttgttgcatgatgaacgcggccca
gtcctcgagtcggtcatcgctcgaacaatccgccgcatggagcagacgaacgagtacgtg
cggctcgtcggcctgtccgcgacgctgcctaactaccaggacgtcgctaccttccttcgc
gttgacacgacgaagggcctgttttacttcgacgcgtcgtaccgtccgtgcgccctccag
cagcaatttatcggtgtcaccgagaagaaggcgatcaagcggtaccaggtgatgaacgag
gtttgctacgagaaggttctggaccaggctgggaagaaccagacactcgtgttcgtccac
tcccggaaggagacggcgaagacggcgaagttcatccgcgacatggcgatcgagaaggag
acgatcacgcagttcgtcaagccagagggcgccacgcgtgagatcctgctcgaggagtcg
aacaacgtcaaggacccgaacttgaaggaccttcttcagttcggtttcggtatccatcac
gccggtatgtcgagggaggaccgtgggctcgtcgaggagctcttcggcgatggtcacatt
caagttctcgtctgtaccgcgacgctcgcgtggggtgttaaccttcctgcccacaccgtc
atcatcaaggggacccagatctacaacccggagaagggtcgctgggtggaattgtcgtcg
caggacgtcctgcagatgcttggtcgtgctggtcgccctcagtacgacacgtacggagag
ggtgtgatcatcaccaaccactccgagctccaatactacctgagcttgatgaaccagcag
ctgcccatcgagtcgcagttcgtcgcgaagctcaccgacaacctcaacgccgagatcgtc
ctcggtaccatccggaaccgtgatgaggccgttcagtggcttggttacacctacctgtac
gttcggatgctcaaggaccccgtattgtacagcgtcggcatcgactactcagagggcgac
ccgacgctggttcagaagcgcgctgatatcgtccacaccgccgccgcgttgttagagaag
tgccacctcatcaagtacgagcggtctaccggtcgcttccacagcacggagttgggccgc
atcgcgtcgcactactacgtgacgtacagctcgatggcaacctacaaccagcacctccgt
cccacaatgtcgatgctcgagctgttccgcgtcttcgcgctctcgaacgagtttaagctc
attcccgtccggcaagatgagaagctcgagctgggcaagttgcttgagcgggtgcctatc
cctgtcaaggaggcggtcgaggagcctgctgccaagatcaatgtcctcttgcaggcttac
gtctcgcagctcaagctcgaaggtttcgcgctcgttgcggacatggtctatgttcaacag
tcagccggacgtatcatccgggccatcttcgagatctgcttgaagcgtggttgggctgtt
cctgcgaaggcggcccttgacttgtgcaagatggtggagcggcgaatgtggggatccatg
acgcctctgcgccaattcaagggcgttccgagcgagatcatccggaaggctgaggcaaag
caattcccttggtaccgctacttcgatctgagcccgcccgagattggtgaactcatcggg
atccagaacgctggtcggttggttcatcgtctcgtccacaacttccccaagcttcagctg
caagctcaggttcagcccatcacgcgcaccttgcttcgcatcgacttgacgatcattccc
gacttccgatgggacgagaaggtccacggcgggtcagaatccttctggatactcgtcgag
gacgtcgacggcgagatcgtcctgttccacgacacctttatcctccgccagcgatatgcc
gaagacgagcactacgtgaccctcactgtccccatgttcgagcccgtccctcccaactac
ttcatctccattgtctctgaccgttggttgcacgccgagacccgcctcccgatctccttc
aagcatctcatcctccccgagaagttccctgcccccacgcccctcctcgacctgcaagct
cttccgctttcggcgctgcacaacaaggacttcgagagcatctactcgtcgaccatcgag
accttcaacaagatccaaacacaggtcttccaggccctgtacacgacagacgacaacgtt
ttcattggcgcgccgactggcagtggcaagactatttgtgccgagttcgctctactccgc
ctttggagcaagcgcgagcagaagcgggcggtttgcatcgagccctaccaggagatggtc
gaccagcgcgtggaagaatggcgtaagaagtttggcagcctgcagggcggcaaggagatt
gttagtctgactggcgagacgagcgcggacctgcgcctcctcgagaagggcgacctgatt
gtctgcactcctatgcagtgggacgttctctctcggagatggcgtcagcgtaagaatgtc
cagaacatcgggctgctgatcgccgacgaggtccagctcgttggtggagaggttgggccg
acgtatgaagttgtcatctctcgcactcgctatgtttcggcgcagaccgacatcaagacc
cgtatcgtcgcttgcggcgtctctctggcaaatgcgcgagacttgggcgagtggatgggc
gcaccctcacacgccatcttcaacttcccgcctagtgctcgtcccctcgacatggacatc
cacatccagagcttccagatccctcacttcccgtcgctcatgatcgccatgtcaaagccc
gcatacctcgccatgtgcgaatactcaccgcacaagcctgttatcatcttcgtcccatct
cgtcgacagtgccgtctcaccgccgatgacatcataacccactgcagcgccgacgacaat
ccgaatcgcttcctgcacgttgaggaagctgaccttgcgcctcatttagagcacgttacc
gacgcaggcctcaaggagacgttgaaacacggtatcggctactaccacgaggctcttgac
aagcaagacaagcgtatcgtcgagaggctgttccagcacggcgctatccaggtcctcatt
gcttccaaggacaccgcgtggagtctacccgtctccagttacctggtcatcatcatgggc
gtgcagaactacgaaggcaaggagcaccgttacgtcgactaccccgtcatggacgtcctg
cagatgatgggtcgtgcatgccgcccgcttgaagacgagaagagccgcgcagtgctgatg
tgtcagcaaactcgcaaggacttctacaagaagttcttggctgagggtctccccatcgag
tctcatctaccgacgcatatgcttcacgactacttcctggcggagatcgctgttaagacc
attgagaacaagcaggatgcgatggatatcttgacatggacgtacttctaccgccgcatg
acgcaaaatcccaactactacaacctgcacaacgtcagccaccagcatctatcagatcat
ctgtcggagctggtcgagtccactctcaacgacctcgtcaactcgaagtgtatcgcgatc
gaggacgagatggacgtgtcaccattgaacctcggcatgattgcggcatactacaacatt
tcttatgtcaccgtcgaggtgtacactctgtcgctcaaggaacgtacgaagctcaagggt
ctgctcgaggttgtatcatcgtctgcagagttcgagtcgattcccatccggcgacacgag
gacgtgctattgcgtcgcatctacgaccgcgttcccgtcaagctcgagaaggccgacttc
gaggcgccccacttcaagacgttcctgctactccaggcgcacttctcccgtcttcagctc
cctccagaccttgccgcggaccaggtgctcgtactcgaaaaggtcctcaacttgctgtca
gcttgtgtcgacgtcatgtcatcaaacgcgtggctcaacgctctcggagcgatggacttg
tcgcagatgtgcgtgcaggcgtcgtgggagaccgactcgcccttgaagcagatccctcac
ttcgagcctgatgtcatcaagaggtgcaaagaggccggtgtcgagactgtctacgacatc
atggagatggaggacgacaagcggaacgggctcctgcagatggatgcgaggcagatgcgg
gatgtcgcaacattcgtcaactcgtatcctaccctggacgtcaactacgagcttgcgaag
ggtgaatacacggctggcgcgccaatcaccatccaaatctcgctctcgaaggacgccgac
gaggagatggacgtcaacgaggatgacgaggtagtcgtcgcgccattctaccccaagaag
aagctggcgaactggtggatcgtcgttggcgagcccaagacgaagcagctcctcgcgatc
aagaaggtcacggtgcaccgcaacctcgccgtgcgcctcgagttctctctgccacagggc
gagcacgcgctcaagctctacgtcatctgcgattcgtacatgggcgccgaccacgacatc
gacctcgatcctctcgaggttgctgagggcgaagatagcgatagcgaagaggagagcgat
gatgccatggaggagtag
DBGET
integrated database retrieval system
