Terrisporobacter vanillatitrophus: TVTCOM_01140
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Entry
TVTCOM_01140 CDS
T11160
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tvt Terrisporobacter vanillatitrophus
Pathway
tvt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tvt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TVTCOM_01140 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvt03021
]
TVTCOM_01140 (rpoC)
03400 DNA repair and recombination proteins [BR:
tvt03400
]
TVTCOM_01140 (rpoC)
Enzymes [BR:
tvt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TVTCOM_01140 (rpoC)
Transcription machinery [BR:
tvt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TVTCOM_01140 (rpoC)
DNA repair and recombination proteins [BR:
tvt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TVTCOM_01140 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Apocytochr_F_C
Pkinase_fungal
Motif
Other DBs
NCBI-ProteinID:
XAM50023
LinkDB
All DBs
Position
82479..85964
Genome browser
AA seq
1161 aa
AA seq
DB search
MFELNNFESIKIGLASPERIREWSYGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYRRVRYKGVICDRCGVEVTKSKVRRSRMGHIELAAPMSHIWYFKGIPSRMGLLLDM
SPRSLEKILYFASYVVIDPGETGLNEKELINEDKFRTVYREHGNTFEVGMGAEAVNKLLQ
KIDLEKESKMLRDDLKDSTGQKRVRTIRRLEVVEAFRKSGNKPEWMILDAIPVIPPDLRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLELGAPDIIVRNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKFYQCGLPRK
MALELFKPFVMDRLVKEGYAHNIKSAKSIVEKVKPEVWDVLEDVIKSHPVLLNRAPTLHR
LGIQAFEPILVEGKAIKLHPLVCTAYNADFDGDQMAVHVPLSVEAQAEARFLMLSVNNIL
APKDGTPITTPSQDMVLGSYYLTIESQGGEKGTGSIFKDYNELLMAYQTKAVELHATVKV
RKVFPNGKKGLIESTVGRFIFNENMPQNLGFVDRNVDPFKLEIDFLVDKKALGKIIDKCF
RRHGNTKTAEVLDHIKALGFKYSTVGGITVAVADMKVPKEKAEYIAAAEKQVDKFEKAYG
RGLISNEERYEKVIETWTETTNKVTDALMDGLERMNNIYIMAHSGARGSKNQIRQLAGMR
GLMANASGKTVEIPVKSNFREGLSVMEYFISSHGARKGLSDTALRTADSGYLTRRLVDVS
QDVIVRDYDCGTTDTSTIVAIKEGNEVIEELYDRIVGRYTIDPIVNPNTGEVIVESDAMI
MEEQAEEIVAAGIEEVQIRTVLNCKTRHGVCSKCYGRNLATGKEVNIGEAIGIIAAQSIG
EPGTQLTMRTFHTGGVAGGDITQGLPRVEELFEARKPKGLSVIAEIDGRVEIDETGKRKE
IIVVPNEGEKEVYSIAYNSRLRVKQGQMVKAGDPLTQGSINPHDIVRVQGIGGVQGYIVK
EVQRVYRLQGVDVNDKHIEVIVRQMLSKVKVEDPGDTDLLPGGYEDVLTFEKCNDEAIAN
GLRPATAKRVLLGITKASLATESFLSAASFQETTRVLTEAAIKGKEDHLIGLKENVILGK
LIPAGTGMKKYRNIAVEKIEE
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgaattaaacaatttcgagtcgattaaaataggattagcttctccagaaagaata
agagaatggtcttatggtgaagtaaaaaaaccagaaacgataaactaccgtactttaaag
ccagagaaagacggtttattctgtgaaagaatatttggaccacaaaaagactgggaatgt
cattgtgggaaatacagaagagttagatataaaggtgtaatatgcgatagatgtggtgtt
gaagtcactaaatctaaagtaagaagatctagaatgggacatatagagcttgcagctcct
atgtctcacatatggtacttcaaaggaataccaagtagaatgggtcttttgcttgatatg
tcacctagatcactagaaaaaatattatattttgcttcttatgttgttattgatccagga
gaaacaggattaaacgaaaaagagttaataaacgaagataagtttagaactgtttataga
gagcatggaaacacttttgaagttggaatgggtgcagaagctgttaataaacttttacaa
aaaatagacttagaaaaagagtctaaaatgttaagagatgacttaaaagacagcactgga
caaaaaagagtaagaacaataagaagattagaagttgttgaagcattcagaaaatctgga
aataaaccagaatggatgatattagatgctataccagtaattccaccagatttaagaccg
atggttcaattagatggaggtaggtttgcaacttctgacttaaatgacttatatagaaga
gttataaatagaaataacagacttaaaagattattagaacttggagctcctgatatcatc
gttagaaatgaaaagagaatgcttcaagaagcagtagatgctctaatagataatggtaga
aggggaagaccagtaactggacctggtaatagaccacttaagtctttatcagacatgtta
aaaggtaagcaaggacgtttccgtcaaaacttacttggtaaacgtgttgactactcagga
cgttctgttatcgttgttggaccagaacttaaattctatcaatgtggtcttccaagaaaa
atggctcttgaattattcaagccatttgtaatggatagattagttaaagaaggttatgca
cacaatattaagagtgctaaatctatagttgaaaaagtaaaaccagaagtatgggatgta
cttgaagatgtaatcaagagtcatccagttttacttaaccgtgcaccgacactacacaga
ttaggtatacaagcatttgaaccaatattagttgaaggaaaagcaattaagctacatcca
cttgtatgtacagcatacaatgctgacttcgatggtgaccaaatggccgttcacgttcct
ttatctgttgaagcacaagcagaggcaagattcttaatgctttctgtaaataatatactt
gcgcctaaagatggtactccaataactactccatctcaagatatggttctaggaagttat
tacttaacaatagaatcacaaggtggagaaaaaggaacaggaagtatatttaaagactac
aatgaattattaatggcttaccaaactaaagctgttgaattacatgctactgttaaagta
agaaaagtattcccaaatggaaaaaaaggattaatagagagtactgtaggtagatttatt
ttcaatgaaaatatgcctcaaaacttaggatttgtagatagaaatgtagatccatttaaa
ttagaaatagatttcttagttgataaaaaagcattaggaaaaataatagacaaatgcttt
agaagacatggtaatacaaaaactgcagaagttctagatcacataaaagccttaggattt
aaatattctacagttggtggtataacagttgcagttgcagatatgaaagtaccaaaagaa
aaagcagaatatatagctgctgctgaaaaacaagttgataagtttgaaaaagcttacgga
agaggacttatatctaatgaagaaagatatgaaaaagttatagaaacttggacagaaact
actaataaagtaactgatgcacttatggatggacttgaaagaatgaataacatctatata
atggcccattcaggagccagaggttctaagaaccaaataagacagttagctggtatgcgt
ggtttgatggccaatgcatctggtaaaacagtagaaattccagttaaatctaacttccgt
gaagggttatcagttatggaatactttatatcatcgcatggtgcgagaaaaggactttca
gatacagctcttcgtacagccgattcaggttacttaacgagaagacttgttgacgtttct
caagatgttatagttagagattatgattgtggaactactgatacttcaacaatcgtagct
ataaaagaaggtaacgaagttattgaagaattatatgacagaattgtaggaagatatact
atagatcctatagtaaatcctaatacaggagaagttatagtagaatctgatgctatgata
atggaagaacaagctgaagaaatagtggcagcgggaatagaagaagttcaaataagaact
gttcttaactgtaaaactagacatggtgtttgttcgaaatgttatggtagaaacttagct
actggaaaagaagttaatataggtgaagctataggtataatagctgctcaatcaatcggt
gaaccaggtacacagcttacaatgcgtacattccatacaggtggggttgccggtggagat
ataactcaaggtcttccaagggttgaagagttattcgaagcaagaaaacctaaaggttta
tctgtaatagccgaaatagacggtagagttgaaatagatgaaactggtaagagaaaagaa
ataatagttgtacctaatgaaggtgaaaaagaagtttactcaatagcttacaactctaga
ttgagagttaaacaaggccaaatggttaaagctggagatcctttaacacaaggttctata
aatccacatgatatcgtaagagttcaaggtataggtggagttcaaggatatatagttaaa
gaggttcaaagagtgtatagacttcaaggggttgacgttaacgataagcatatagaagtt
atagtaagacaaatgctatctaaagtgaaggttgaagatccaggagatacagatttatta
ccaggtggttacgaagatgtattaacgtttgaaaaatgtaatgatgaagctatagctaat
ggacttagaccagcgacagctaagagagtattacttggaataactaaagcatctcttgct
acagaatcattcctatcagctgcttcattccaagaaactacaagagttttaactgaagct
gcaataaaaggaaaagaagaccacttaataggactaaaagaaaatgttatattaggtaag
ttaattccagcaggaacaggaatgaaaaaatatagaaatatagccgttgaaaagatagaa
gaataa
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