Terrisporobacter vanillatitrophus: TVTCOM_01480
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Entry
TVTCOM_01480 CDS
T11160
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tvt Terrisporobacter vanillatitrophus
Pathway
tvt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tvt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TVTCOM_01480 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvt03021
]
TVTCOM_01480 (rpoA)
03400 DNA repair and recombination proteins [BR:
tvt03400
]
TVTCOM_01480 (rpoA)
Enzymes [BR:
tvt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TVTCOM_01480 (rpoA)
Transcription machinery [BR:
tvt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TVTCOM_01480 (rpoA)
DNA repair and recombination proteins [BR:
tvt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TVTCOM_01480 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
DUF2325
Rrn6_HB
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
XAM50057
LinkDB
All DBs
Position
105334..106281
Genome browser
AA seq
315 aa
AA seq
DB search
MIEIEKPKVDIVELGEDYRYGKFVIEPLERGYGTTIGNALRRILLSSLPGVAVNSIRIDG
VLHEFSTVPGVKEDVTEIILTLKELSAAIDGEGSRTLKIQAQGPCTVTGADIICPPDVEI
LNKDLLIATLDDNAKFNMEINIDKGRGYVPAEENKTENMPIGVLPVDSIYTPVQKVSYHV
ENTRVGQKSDYDKLTLEVWTNGSINPQEGISLAAKVLVEHLNLFIDLTEHVSNVEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVEELANKSEDDMMKVRNLGKKSLEEVI
QKLEELGLGLKPSEE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaatagaaaaaccaaaagtagacattgtagaacttggtgaagattatagatat
ggaaaatttgtcattgaacctttagaaagaggatatggaactactatagggaatgctcta
agaagaatattattatcttctttacctggtgtggcagtgaattcaataagaatagatggt
gttcttcatgaattctcaacagtaccaggagttaaagaagatgttactgaaataatatta
actctaaaagaactttctgcagctatagatggagaaggaagtagaactcttaaaattcag
gctcaaggaccttgtactgtaacaggagcagacataatctgcccaccagatgtagaaata
ttaaataaagacttattaatcgctactttagatgataatgctaaatttaatatggaaata
aacattgacaaaggtagaggatatgttccagccgaggaaaacaaaactgaaaatatgcct
ataggtgttttacctgtagactcaatatacactcccgtacaaaaagttagctaccatgta
gaaaacacaagagttggtcaaaaatcagattatgataaattaacacttgaagtatggact
aatggaagcattaatcctcaagagggtatatctcttgcagctaaagtattagttgagcat
ttaaatctattcattgacttaactgagcatgtaagcaacgttgaaataatggtagaaaaa
gaagaagatcaaaaagaaaaagttcttgaaatgactattgaagagcttgatttatcagta
agatcttacaactgtttaaagagagcgggaattaatacagttgaagaattagctaataaa
tcagaagatgatatgatgaaggttagaaaccttggtaaaaaatcacttgaagaagttatt
caaaaacttgaagaattaggattaggacttaaacctagcgaagaataa
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