Terrisporobacter vanillatitrophus: TVTCOM_26910
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Entry
TVTCOM_26910 CDS
T11160
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
tvt Terrisporobacter vanillatitrophus
Pathway
tvt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tvt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TVTCOM_26910 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvt03019
]
TVTCOM_26910 (rny)
Messenger RNA biogenesis [BR:
tvt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TVTCOM_26910 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
KH_NusA_2nd
MctB
Motif
Other DBs
NCBI-ProteinID:
XAM52577
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Position
complement(2693797..2695383)
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AA seq
528 aa
AA seq
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MMLKNNIDILGLLQKEVDVIEIIASILGLAIGIIVGYFVRKNISETKIGEAKDLAKDIID
KANKDSETIKKEKLLEAKEEIHKWRTDAEKEQRERRNEVQKYERRVLQKEESIEKKQQNL
EVKESSLNEKLKVVQRKEDEVEEIKVKQLEKLEDISGVTCEKAKDIILANAEREVRHEMS
IMIKDIETQAKEEAEKKSREIIGYAIQKCAADHVAETTVTVVNLPNDEMKGRIIGREGRN
IRTLETLTGIDLIIDDTPEAVILSGFDPIRREVARIALEKLISDGRIHPARIEEMVEKAR
KEVDSIIKEFGEQATFETGVHGLHPELVKLLGRLNYRTSYGQNVLKHSIEVAHIAGIMAA
EIGADIKLAKRAGLLHDIGKAVDHEMEGTHVEIGMDLLRRYKESKDVIHAMSTHHGDYEP
QIVEAVLVTAADAISAARPGARRETLEAYIKRLEKLEEIANSYEGVEKSYAIQAGREIRI
MVKPDSVNDEELHLLARKMTKQIEDELEYPGQIKVSIIRETRAIEYAK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgatgttaaagaataatattgatattttgggattattacaaaaggaggtggatgtcata
gaaataatagccagcatacttggtttagctattggtattatagttggatattttgttaga
aaaaatatatctgaaactaaaattggtgaagctaaagacttagccaaagatataatagat
aaagcaaataaagactcagaaacaataaaaaaagaaaaattattagaggcaaaagaagag
attcacaaatggagaactgatgcagaaaaagaacaaagagaaagacgtaatgaagttcaa
aagtatgaaagaagagttcttcaaaaagaagaatctattgaaaagaagcaacaaaatcta
gaggttaaagaatctagtttaaatgaaaagttaaaagtggtacaaagaaaagaagacgaa
gtagaagaaataaaagttaagcaacttgaaaagcttgaagatatatcaggggttacttgt
gaaaaagctaaagatataattcttgcaaatgctgaaagagaagtaagacatgaaatgtct
ataatgattaaggatattgaaacgcaagctaaagaagaagctgaaaagaaatctagggaa
ataataggctatgctatccaaaaatgtgcagcagatcatgttgcggaaacaacagtaact
gttgtgaacttaccaaatgatgaaatgaaggggagaataataggtagagaggggagaaat
ataagaactctagaaactttaacaggtatagatcttataattgatgacactccagaagct
gtaattttatcaggcttcgatcctattagaagagaagtagcaagaatagcattagaaaag
ctaatatcagatggaagaatacatccagctagaatagaagagatggtagaaaaagcaaga
aaagaagttgatagtatcatcaaagagtttggagaacaagctacttttgaaactggtgta
catggattacatcctgaactagttaaactacttggtagattgaattatagaacaagttat
ggacaaaatgtattaaagcattcaatagaagttgctcatatagcaggaattatggcagca
gaaattggtgcagatataaaactagctaagagagctggtttacttcatgatataggtaaa
gcagtagatcatgaaatggaaggaactcatgttgaaataggtatggatttacttagaaga
tataaagaatctaaggatgttatacatgcaatgagtactcaccatggagattatgagcca
caaatagttgaggctgtattagttacagcagcagatgccatatctgcagcaagaccagga
gcaagaagagaaactttagaagcatatattaagagattagaaaagcttgaagaaatagct
aactcttatgaaggtgtagaaaaatcttatgcaattcaagctggtagagaaatcagaata
atggtcaaacctgatagcgtaaatgatgaagaacttcacttattagctagaaagatgact
aaacaaattgaggacgagcttgaatacccaggtcaaataaaagtaagtataataagagaa
acaagagcaatagaatatgctaaataa
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