Terrisporobacter vanillatitrophus: TVTCOM_27080
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Entry
TVTCOM_27080 CDS
T11160
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tvt Terrisporobacter vanillatitrophus
Brite
KEGG Orthology (KO) [BR:
tvt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tvt03016
]
TVTCOM_27080 (truB)
Enzymes [BR:
tvt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TVTCOM_27080 (truB)
Transfer RNA biogenesis [BR:
tvt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TVTCOM_27080 (truB)
Prokaryotic type
TVTCOM_27080 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motile_Sperm
Motif
Other DBs
NCBI-ProteinID:
XAM52594
LinkDB
All DBs
Position
complement(2713927..2714835)
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AA seq
302 aa
AA seq
DB search
MNKIVNILKPTGMTSHDVVSRVRRILSMKKVGHTGTLDPDAAGVLPICLNKATKVSELIL
NKEKSYICELTLGVATDTYDSSGVITFEGDASNITSEHIYKAFETQKGEINQYPPVYSAL
KINGQKMCDLARKGKADTIEIKPRKVNIEQIKILNIIENKVLFLVKCSKGTYVRSICHDI
GKYLKCGGHMSFLLRTSSGKFNLENAITLEELEKYYNDNILENHLYDIDYVLDNFKKVEL
KDTALKYYRNGGIIDSKRFTNDNLSQNDEYVRVYCNDEFIGTGKLLKNNNTISLKSDKIF
IE
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatagtaaatatattaaaacctacaggtatgacatctcacgatgtagtaagt
agagtgagaagaattttaagcatgaaaaaagttggtcatacaggaacgttagatcctgat
gcagctggagttcttcctatatgtttaaacaaggctacaaaagtaagtgagcttattttg
aataaagaaaaatcatatatatgtgaattaacattaggtgttgctacagacacttatgat
tcttctggagtaataacattcgaaggtgatgcttcaaatattacaagtgaacatatatac
aaagcttttgaaacacaaaaaggagagattaatcagtatcctcctgtttattcagctttg
aagattaatggacaaaaaatgtgtgatttagctagaaaaggaaaagccgacactattgaa
attaagcctagaaaagttaatatagaacaaataaaaattttaaatataattgaaaataaa
gtattatttttagttaaatgttcaaagggtacttatgttagaagtatatgtcatgatatt
ggtaagtacttaaagtgtggaggacatatgtcctttttacttagaacatcttctggaaaa
ttcaacttagaaaatgcaataactctagaagaattagaaaaatattataatgataacatc
ctagaaaatcacttatatgatattgattatgttctagataattttaaaaaagttgaatta
aaagatactgctcttaaatactatagaaatggtggaataatagattctaaaaggtttaca
aatgataatttatcacaaaatgatgaatatgtcagggtatattgtaatgatgaatttata
ggaactggaaaattattaaaaaataataacactattagtctaaagagtgataaaattttt
atagaataa
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