Terrisporobacter vanillatitrophus: TVTCOM_28410
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Entry
TVTCOM_28410 CDS
T11160
Symbol
spoVD_1
Name
(GenBank) Stage V sporulation protein D
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
tvt Terrisporobacter vanillatitrophus
Pathway
tvt00550
Peptidoglycan biosynthesis
tvt01100
Metabolic pathways
tvt01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
tvt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TVTCOM_28410 (spoVD_1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TVTCOM_28410 (spoVD_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tvt01011
]
TVTCOM_28410 (spoVD_1)
Enzymes [BR:
tvt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
TVTCOM_28410 (spoVD_1)
Peptidoglycan biosynthesis and degradation proteins [BR:
tvt01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
TVTCOM_28410 (spoVD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Acp26Ab
Motif
Other DBs
NCBI-ProteinID:
XAM52727
LinkDB
All DBs
Position
complement(2857760..2859421)
Genome browser
AA seq
553 aa
AA seq
DB search
MTRTKKNTSNKLIRRRIKCFFIVFLLLCTYLTYEISNLAIFKNKEYESKVERQSLETINL
NSGRGIIYDRNNLPLTDKKKTKVLLVPKDIISGNYQNVALIKKATKLTEEDIYKAVQEQL
SNEIIEIDIDYIDESKIDDLKEKNISVNEKTIRYSDNNLLTHLIGYVKKSENNGVSGIEK
YMNEELKDSNKNYVSVFKAGVNNKGLNYLKGSIEESSSGENSSHLKISIDSKIQENVEKI
MDKEENPSSVIISDVKTGAILSMSSRPNFNQNEIYDYSNSTKGELQNRALAVTYPPGSVF
KLVVLYAAFENNVIDENYRYYCNGSTKIGSSNKVLNCNNNVAHGSQDVSDALANSCNCAF
YDIAKRVGSEKIFEAIKTLHLDEKVDIGIDEEKNSKIPEDIALSNLAIGQANIEFTPLQI
NQLTQVIANNGTYMPLYIYDSIIDNNKNTIKEYKTNKKSDIMSPYTMTRIKNMMMKVSKV
GTAKALADLKGGCGVKTGTAQSSLNGKDISHGWITGFYPEINPKYAITIIVEGTEKESKS
ATPIFKEICENLK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgacaaggacgaaaaaaaacacatcaaataaattaataagaagaaggataaaatgtttt
tttattgtttttttactattgtgcacttatctaacatatgaaatatcaaatttagcaata
tttaaaaataaagaatatgaaagtaaagtagaaagacaaagtttagaaacaataaattta
aatagtggaaggggaataatttatgatagaaataatttaccccttacagataagaaaaaa
actaaggtattacttgtaccaaaggatataataagtggcaattatcaaaatgtagccctt
ataaaaaaagcaacaaagttaacggaagaagatatatataaagcagtacaagaacagtta
tcaaatgaaattattgaaatagacattgactatattgatgaaagtaaaatagatgactta
aaagagaaaaatatttcagtaaatgaaaaaactattagatactcagataataatctacta
actcatttgataggatacgtaaaaaaatcagaaaataatggagttagtggtatagagaaa
tatatgaatgaagaactaaaagatagtaataaaaattatgtatcagtgtttaaagcaggc
gtaaataataaaggccttaattacttaaaaggtagtatagaagaaagttcaagtggagaa
aattcttcacatcttaaaataagcatagattctaagatacaagaaaacgtagaaaaaatt
atggacaaagaagaaaatccaagttcagtaataatatcagatgttaaaacgggtgcaatt
ttatccatgagctcaagaccaaattttaatcaaaatgaaatatatgattatagtaatagt
acaaaaggtgaactacaaaatagggcactagctgttacctatcctccaggatctgtattt
aagctggtagtactatatgcagcatttgagaataatgtaatagatgaaaattacagatat
tactgtaatgggagcacaaaaataggatcttcaaataaagtattgaattgtaataataat
gtggcccatggttcacaagatgttagcgatgcattagctaattcctgtaactgcgcattt
tatgatatagcaaaacgggtaggtagtgaaaaaatatttgaagccataaaaacacttcat
ttagatgaaaaagtagatataggaatagatgaagaaaagaattctaaaatacctgaagat
atagctcttagtaatttagctattggtcaggctaatatagaatttactccacttcaaatt
aatcaacttactcaagtaatagctaataatggtacatatatgccattatatatatatgat
agtattatagataataataaaaacaccataaaagaatacaagactaataaaaaatcagat
ataatgtctccttatactatgactagaattaaaaatatgatgatgaaagtatcaaaggtt
ggtacagcaaaagcattagccgatttaaaaggaggatgtggtgtaaaaacaggtactgct
caaagtagtttaaatggaaaagacatatctcatggatggattacaggtttttacccagaa
ataaatcctaaatatgcaataacaattatagttgagggaacagaaaaggaaagtaaatca
gcaactccgattttcaaagaaatctgtgaaaatttaaaataa
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