Terrisporobacter vanillatitrophus: TVTCOM_29990
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Entry
TVTCOM_29990 CDS
T11160
Symbol
dinG_4
Name
(GenBank) 3'-5' exonuclease DinG
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
tvt Terrisporobacter vanillatitrophus
Pathway
tvt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tvt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TVTCOM_29990 (dinG_4)
09124 Replication and repair
03420 Nucleotide excision repair
TVTCOM_29990 (dinG_4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvt03021
]
TVTCOM_29990 (dinG_4)
03036 Chromosome and associated proteins [BR:
tvt03036
]
TVTCOM_29990 (dinG_4)
03400 DNA repair and recombination proteins [BR:
tvt03400
]
TVTCOM_29990 (dinG_4)
Enzymes [BR:
tvt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
TVTCOM_29990 (dinG_4)
Transcription machinery [BR:
tvt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TVTCOM_29990 (dinG_4)
Chromosome and associated proteins [BR:
tvt03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
TVTCOM_29990 (dinG_4)
DNA repair and recombination proteins [BR:
tvt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TVTCOM_29990 (dinG_4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Helicase_C
PhoH
PDDEXK_1
DUF1542
Motif
Other DBs
NCBI-ProteinID:
XAM52885
LinkDB
All DBs
Position
complement(3020450..3022783)
Genome browser
AA seq
777 aa
AA seq
DB search
MKKIKISVRNLVEFIMKKGSIDNRFVGNIKAIEGIRGHQKVQKSYGDEYTSEISIKHTFT
YEEVEIEVEGRIDGLLIENSKVIIDEIKTTTKDLLLIDEDSNPLHWAQVKCYGYMYCIQH
DLDNIDLQVTYYNIENKSTRILRKNFQLRELKEFFFKLIDEYKLWVNMEKQWMEIRNESI
KSLKFPFEKYRPGQREFAVRVYKSIVDRKKCFAMAPTGTGKTISTLFPAIKAMGEGKTSK
IFYLTAKTITREVVNDTINVMKKQHLNLKSITITAKEKICKMEDVNCNPDYCPYAKGYYD
KINNALKEILTKYSDFSRKKIDEISEVYKLCPFELCLDLTMFSDVIICDYNYIFDPRVYL
KRYFDVKKTDFTFLVDEAHNLLDRSRNMYSAEINQNIFIKMKKIIGKKDKRILNTIKEIE
KYFTDKSKVLNLIKEKHIIEEELPRSLIELFNILMKFMDEYLSRGNEDNSELLDLYFEVN
KFLSISIFYNDNYRTICSDELLGVSVKLFCANPSDLIIEKMNKSKSTTIFSATLTPLNYY
KELYGSEDRDFVIDLKSPFDVNNRLIMIGDNISTKYNKREDTVEDLVEYIKVCVESKIGN
YMVFFPSYKYMELAYEKIRDKYEQLNVIIQENNMSEEEKKEFLNLFNDNKETHVGFCVLG
GHFSEGIDLTEDKLIGVIVVGVGMPQINIERDIIKDQLNENNKGFDYAYVYPGMTKVLQA
VGRCIRTTNDRGVILLLDNRYSNYKYKSLFPKEWNPYVRIKKPNDIKSLCKKFWDNE
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaataaaaatatcagtgagaaacttagttgagtttattatgaagaagggaagt
atagacaatagatttgtaggaaatattaaagcaattgaaggaattagaggccatcaaaaa
gtgcaaaaatcctatggagatgaatatacttcagaaatatctataaaacatacatttact
tatgaggaagtagaaatagaagttgaaggaagaatagacggactattaattgaaaatagt
aaagttataattgatgaaataaaaactactacaaaagatttgctattaatagatgaagat
agcaatccacttcattgggctcaggtaaaatgctatggatatatgtattgtattcaacat
gatttagataatatagatttacaagtaacttattataatatagagaataaatctacaaga
atattgagaaaaaacttccaactaagggaattaaaagagtttttctttaagttaatcgat
gaatataaactatgggtaaatatggagaaacaatggatggaaataagaaatgaatccatt
aaaagcttaaagtttccatttgaaaaatataggccagggcaacgagaatttgcagtgaga
gtttataaaagtatagtagatagaaagaaatgttttgccatggcaccaacaggtacagga
aaaactatatcaacactttttccagctataaaagcaatgggagaaggtaaaacgtcaaaa
attttttaccttacagcaaaaactataacacgagaagtagtaaatgatactataaatgtg
atgaaaaaacaacacttaaatttaaaaagtataacaataactgcaaaagaaaagatatgt
aagatggaagatgtcaattgtaatccagattattgtccttatgccaaggggtactatgat
aaaataaacaatgcgcttaaggagattctaactaaatatagtgattttagcagaaaaaaa
attgatgaaataagtgaagtttataaattgtgcccctttgaattatgtcttgatttaact
atgtttagtgatgtaataatttgtgattataattacatatttgatcctagagtttattta
aaaagatattttgatgtaaaaaaaacagattttacatttcttgtagacgaggcacataat
ttattagacagaagtagaaatatgtattctgccgaaataaatcaaaatatttttataaaa
atgaagaaaataataggtaaaaaagataaaagaatattaaatacaataaaagaaatagaa
aaatattttacagataaatcaaaggtattaaatttaataaaagaaaaacatattattgaa
gaggaattgcctagatctcttatagaactatttaatattttaatgaagtttatggatgaa
tatttatcaagaggtaatgaagataactctgaactactagatttgtattttgaagttaat
aaatttttatctatttcaattttttataatgacaattatagaactatatgtagtgatgaa
ttgttaggtgttagtgtgaaactattttgtgcaaatccttcagacttaattattgaaaaa
atgaataaatctaaatctacaacaattttttctgcaactttaacacctttaaactattac
aaagagctctatggtagtgaggatagagacttcgtaatagatttgaagagcccttttgat
gtaaacaacagattgataatgataggagataatatttctactaaatataataaaagagaa
gatacagtagaagatttagtagaatatattaaagtttgtgtggaaagtaaaattggaaat
tatatggtatttttcccgtcatataaatatatggaattggcttatgaaaaaattagagat
aaatatgaacaacttaatgtaatcatacaagaaaataatatgagtgaggaagaaaaaaaa
gaattcttaaatttattcaatgataataaagaaactcatgtgggattttgtgtcctggga
ggtcatttttcagaaggtatagatttaacggaagacaagctaataggcgttattgttgtg
ggagttggaatgccacaaataaatattgaaagagatataataaaggaccagttaaatgaa
aataataaaggatttgattatgcttatgtttatccaggaatgacaaaagtacttcaagct
gtagggagatgtattagaaccactaatgatagaggtgtaattttgcttctagataataga
tattcaaattataaatataaaagtctttttccaaaagaatggaatccttatgtgagaata
aaaaagcctaatgatattaagagtttatgcaaaaaattttgggataatgagtga
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