Terrisporobacter vanillatitrophus: TVTCOM_35880
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Entry
TVTCOM_35880 CDS
T11160
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tvt Terrisporobacter vanillatitrophus
Pathway
tvt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tvt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TVTCOM_35880 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvt03019
]
TVTCOM_35880 (deaD)
03009 Ribosome biogenesis [BR:
tvt03009
]
TVTCOM_35880 (deaD)
Enzymes [BR:
tvt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TVTCOM_35880 (deaD)
Messenger RNA biogenesis [BR:
tvt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TVTCOM_35880 (deaD)
Ribosome biogenesis [BR:
tvt03009
]
Prokaryotic type
rRNA helicases
TVTCOM_35880 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
VWA_2
Motif
Other DBs
NCBI-ProteinID:
XAM53469
LinkDB
All DBs
Position
complement(3664029..3665678)
Genome browser
AA seq
549 aa
AA seq
DB search
MNIIKFEDLPISEEIKRSVAELGFEEPSPIQAQSIPVILTGKDVIGQAQTGTGKTAAFSI
PVLDMVDPNKKSVQAVVLCPTRELAIQVSSEMKKLGKYKSGIKTLPVYGGQPIDRQIKSL
KSGVQVVIGTPGRVIDHINRRTLKMGEVKMLVLDEADEMLDMGFREDIELILEQTPSERQ
TTFFSATMSKEILDLTKKYQDDPQLIKIVRKELTVPNIKQYYIETRRANKLEVLCRLVDV
YNPKLSVVFCNTKRGSDELVSELQARGYFADALHGDLKQTQRDIVMDKFRQGTIDILVAT
DVAARGIDVDDVEAVFNYDLPQDEEYYVHRIGRTGRAGREGISFSFVFGKEVRKMKDIER
YTKSKLVRHDIPTIADVEEKKVTAFFKEVKETIKESNLSKQTQWLENLCEEEGLEAIEIA
AALVKLALGDEEKQEIIEEKSSYRDESGRRDRKDRDRGDRKRSRSAEAGMVRLFINVGKN
QRVQAKDVVGAIAGEAGIPGKLVGTIDIYDKYTFVEVPKENAKKVLDKMKNIKIKGNKIN
IEKANTRKK
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaatataataaaatttgaagatttaccaataagtgaagagataaaaagatcagtagcg
gaactagggtttgaggagccatctccaattcaagctcaatctataccagtaattttaaca
ggaaaagatgttataggacaagcacaaacaggaacaggaaagacggcagctttctctata
ccagtactagacatggtagatcctaataaaaaaagtgtacaggcggtagtattatgtcct
acaagagaacttgcaattcaagtttctagtgaaatgaaaaaattaggtaaatataaaagt
ggtataaagacacttccagtttacggcgggcaaccaatagatagacaaataaaatcatta
aagagcggagtacaagttgtaataggaacaccagggcgtgttatagaccatataaatcgt
agaactctaaaaatgggcgaagtgaaaatgttagttcttgatgaagcggatgaaatgtta
gatatgggattcagagaagatattgagctaatacttgagcaaactccaagtgaaagacaa
acgacattcttctcagcaacaatgtcaaaagaaatattagacctaactaaaaaatatcaa
gatgatcctcagttaataaaaatcgtgagaaaagaacttacagtaccaaatataaaacag
tactatatagaaacaagaagagctaataaattagaagtattatgcagattagtagatgta
tataatccaaaattatcagtagtattctgtaatacaaaaagaggctctgatgagttagtt
agtgaattacaagcaagaggatactttgcagatgctcttcacggagatttaaagcaaact
caaagagatatagtaatggataagtttagacaggggacaatagatatacttgttgctaca
gatgttgcagctagagggatagatgttgatgatgttgaagcagtatttaactatgacctt
ccacaagacgaagaatattatgtacacagaatcggtagaactggtcgtgctggtagagaa
ggtatatctttctcatttgtatttggaaaagaagtaagaaaaatgaaagatatcgaaaga
tatacaaaatctaaattagttagacatgatataccaacaatagctgatgttgaggaaaag
aaagtaactgcattcttcaaagaagttaaggaaacaataaaagaaagtaacttatctaag
caaactcaatggctggaaaatctttgtgaagaagaaggattagaagctatagaaatagca
gctgctcttgttaaacttgctttaggtgatgaagaaaaacaagaaataatagaagaaaag
tcaagctacagagatgaatctggaagaagagatcgtaaagatagagataggggcgataga
aagcgtagtagaagtgctgaggctggaatggtaagattatttataaatgttggtaaaaac
caaagagtacaggctaaagatgtagttggtgctatagcaggggaagctggaataccaggt
aaattagtcggaactatagacatatatgataaatatacttttgtagaagttccaaaagaa
aatgcaaaaaaagtattagataaaatgaaaaatataaaaattaaaggtaataaaattaat
atagaaaaagctaatacaagaaaaaaataa
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