Thermoactinomyces vulgaris: AB849_001060
Help
Entry
AB849_001060 CDS
T05864
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tvu
Thermoactinomyces vulgaris
Pathway
tvu03030
DNA replication
tvu03410
Base excision repair
tvu03420
Nucleotide excision repair
tvu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB849_001060 (polA)
03410 Base excision repair
AB849_001060 (polA)
03420 Nucleotide excision repair
AB849_001060 (polA)
03440 Homologous recombination
AB849_001060 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvu03032
]
AB849_001060 (polA)
03400 DNA repair and recombination proteins [BR:
tvu03400
]
AB849_001060 (polA)
Enzymes [BR:
tvu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB849_001060 (polA)
DNA replication proteins [BR:
tvu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AB849_001060 (polA)
DNA repair and recombination proteins [BR:
tvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AB849_001060 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB849_001060 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
Taq-exonuc
TelK_muzzle
Motif
Other DBs
NCBI-ProteinID:
QBK12339
LinkDB
All DBs
Position
complement(206099..208747)
Genome browser
AA seq
882 aa
AA seq
DB search
MDKLILIDGNSIAYRAYYALPLLSNASGQYTNAVYGFTMMLMKILEDEKPTHMLVAFDAG
KTTFRHKDFQEYKGTRKETPNELREQFPLIKEVLDAFQIPYFEESGYEADDIIGTLSKTC
DRKDLDIRIVSGDKDLLQLVNDRVHVLLTRKGITEVEHYDRKAIDEKYGLKPEQIIDLKG
LMGDTSDNIPGIPGVGEKTALKLLRLYPSVEEVIEHADELPGKKLREKVKEHQAQALLSK
KLATIFTDVPLSLELDDLALKERDEEKIVSLFKKLSFNTLLSRLSPQEGRKDDRDLKSIS
YHRIETGEALGPWESFFSKGDKALVVEMTEPHPIKGEFLAMAVSDGETQLVLPAGLVREN
QMVRDWLSDSKKTKFVYDAKTIQTAFQQHAGLQVDGMAFDVLLAAYLLDPSDSHPALSDI
VERRGEGYLPPDEEVYGKGVKRRQLEGDELAEHLSRKARFVHRLTPLLKEQVQEAKLDAL
MYEMELPLSSILSDMEQRGVRVDHERLDELGRELKASMDRLQEEIHDIAGVPFNINSPKQ
LGEILFEKLGLPVIKKTKTGYSTSADVLEKLAPQHEIVEKILHYRQVGKLYSTYIEGLKK
EIGPDGKIHTQFQQTVTATGRLSSTEPNLQNIPIRMEEGRKIRQVFVPSQTGWYMLSADY
SQIELRVLAHLSEDQNLQKAFKEDKDVHAQTAMDVFGVREDEVTDQMRRQAKAVNFGIVY
GISGYGLAQGLDIPQKEAKLFIERYFETYPGIKQYMDSTIEKAKKEGYVTTMLGRRRYLP
KINARNFGERSFAERTAMNTPIQGTAADIIKHAMVKVDRLMREKGLKSRLLLQVHDELIF
EVPEEELTVMKELVQNTMEQAVRLSVPLKVQVSVGSNWYEAK
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
gtggataaattgattttgatcgacggcaacagcatcgcgtaccgggcttactatgcgttg
ccgcttttatccaatgccagcgggcaatataccaatgcggtgtacggctttaccatgatg
ctcatgaaaatcctggaagacgaaaagccgacccacatgctggtggcgtttgatgccggg
aaaaccacattccggcacaaagattttcaggaatacaagggaacgcgaaaagaaacgccg
aacgagctgagggagcaatttcccctcatcaaagaggttttggatgcttttcaaattcct
tactttgaagaaagcggctatgaagcggatgacattatcgggacgctttccaaaacgtgt
gaccgcaaagacctggatatccggattgtcagcggggataaagatttgctgcaattggtg
aatgaccgggtgcatgtgttgttgacccgaaaaggcatcacggaagtggagcactatgac
agaaaggcgatcgacgagaaatacggattaaaaccggaacaaatcatcgacctcaaaggc
ttgatgggggatacttcggacaatatcccgggaattccgggggtcggggaaaagacagct
ctcaaattgctccgtctctatccgtcggtggaagaagtgatcgaacacgccgatgagttg
ccggggaaaaaattgcgcgaaaaagtgaaagaacatcaagcgcaggcgctgttgagcaag
aagctggccaccatctttaccgatgttcccttgtccctggaattggatgatctggctttg
aaagagcgggatgaagaaaaaatcgtttcgttatttaagaagctgtcgtttaacacgttg
ctttcccgcttgtccccgcaagaaggacggaaggatgaccgggatttgaaaagcatttct
tatcaccggattgaaaccggtgaagcgctcggcccgtgggagtcctttttttccaaaggg
gataaggcgctcgtggttgaaatgaccgaaccgcatccgatcaaaggggaatttctggcc
atggcggtttccgacggtgaaacccagctggttttgccggccgggttggtgagggaaaat
caaatggttcgcgattggctttccgattcaaaaaagacgaaatttgtctacgatgccaaa
acgattcaaaccgcctttcaacaacatgccggacttcaggtggacgggatggcttttgat
gtgctgttggcggcttatttgctggatccgtctgattcgcatccggctttgtctgatatc
gttgagcggcgtggggaagggtatttgccgccggatgaagaggtgtatggaaaaggagtc
aaacgccgtcaattggaaggggatgagctggcagaacacctatcgcggaaagcccggttt
gttcacagactcaccccgttgttgaaagagcaagtgcaagaagccaaactggatgcgctt
atgtatgaaatggaactgcctctttcctccattttgtctgacatggaacaaaggggcgtc
cgggtggaccatgaacggttggatgagctgggccgggaattgaaggcgtcaatggaccgg
ttgcaggaagaaatccatgacattgcaggtgtgccgtttaatatcaattctcccaaacag
ctgggggaaatcttgtttgaaaaattggggcttcccgtgatcaaaaaaacgaaaaccggc
tattcaaccagtgcggatgttttggaaaaattggctccgcaacatgaaattgtcgagaaa
attttacattatcgccaggttggaaaattgtattctacttatatagaaggattaaaaaaa
gagattgggccggatggaaaaatccatacccaatttcaacaaacggttacggccaccggc
cggttgagttcgaccgagccgaacctgcaaaacatcccgatccggatggaggaaggcaga
aaaatccgccaggtctttgtcccttctcaaacaggatggtacatgctgtctgcggattat
tcccagattgaactgagagtccttgcccatttgtcagaagaccaaaatttgcaaaaagca
ttcaaagaagataaagatgtgcacgcccaaacagccatggatgttttcggggtcagggaa
gatgaagtgacggatcaaatgcggagacaagccaaagccgtcaactttggcattgtgtac
ggcatcagcggatacggcctggctcaagggctggatattccgcaaaaagaggccaagttg
tttattgagcgttattttgaaacgtatcccggtatcaagcagtatatggacagcacgatt
gaaaaggccaaaaaagaaggttatgtcaccaccatgttgggccggcgccgttatttgccc
aaaatcaatgcccgcaacttcggggaaagaagttttgccgaacggacggccatgaacact
ccgattcagggaacggcggcggatatcatcaagcatgcgatggtgaaagtggaccggttg
atgcgtgaaaaagggttgaaaagccggttgcttttgcaagtgcatgacgaattgatcttt
gaagttcccgaagaagaattgacggtcatgaaagagttggttcagaatacgatggaacaa
gctgtccggttatcggttccactgaaagtgcaagtgagtgtcgggagcaactggtacgaa
gcaaaatag
DBGET
integrated database retrieval system
