Thermoactinomyces vulgaris: AB849_002040
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Entry
AB849_002040 CDS
T05864
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
tvu
Thermoactinomyces vulgaris
Pathway
tvu03030
DNA replication
tvu03430
Mismatch repair
tvu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB849_002040
03430 Mismatch repair
AB849_002040
03440 Homologous recombination
AB849_002040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvu03032
]
AB849_002040
03400 DNA repair and recombination proteins [BR:
tvu03400
]
AB849_002040
Enzymes [BR:
tvu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB849_002040
DNA replication proteins [BR:
tvu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB849_002040
DNA repair and recombination proteins [BR:
tvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB849_002040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_3
DEDDh_C
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
T2SSK
YhfH
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QBK12523
LinkDB
All DBs
Position
complement(411178..415491)
Genome browser
AA seq
1437 aa
AA seq
DB search
MKGRQALVNLFHEAELPEEWLNHAFRDGVIKEVQVRLQDRTWNIHLHLVEPMNAELWQDF
QMRVKKHFQPWVRVNMYFTYDRLQHEIVLQKYKYFIQKCLQEQVTPAAATWFGQAEWQVE
GDRIVVIFPNPAVLKMAKQRETDRYIMKYYERITGTKLPVILSAKETEPEQAAEQFREQK
IQEEKTLMQKALAEQKERAKKQKEKSGHPEEPVVSKKLGYSIKGEPVKIKDIVEEVRNVV
IKGKVFKSELKELKSGRKLLTFNLTDFTDSISCKVFARDKEQAAVLAMIRDGDWLKVRGS
VQYDTFSRELVVMVNSLEETEPDSFARRDTAAEKRVELHLHTSMSAMDGIASAGKMIQRA
AEWGHPAVAITDHAVAQAYPEAYKAAGEHGIKVIYGVEANIVDDGIPIVMNEAEMDLLEG
TYVVFDVETTGLSAVHDVIIELAAVKMKDGKIIDKFSSFANPHRPLSKHIVELTHITDDM
LKDAPEVDDVVADFLEFIEGTVLVAHNARFDMGFLQEAVKRIGKEPVKNPVLDTLELARM
LFPEMRNHRLNTLSDKLGIKLEQHHRAIYDAEATGHVMWKMLQIAVEKKKITHLHMLNEN
RGERDLKRVRPFHAILLVQNQEGMKNLYKLISMSHLKYFYRVPRIPRSELVKHRNGLLVG
SGCERGELYEAALNKSPSEVEEIARFYDYLEIQPVEYNMHLVEKGLVENEERLRQANQLI
VEIGEKLGKPVVATSNAHYLDEQDAIFREIIAANQTGAKPQGTLPKAHFRTTDEMLREFQ
YLGEKKCKEVVVDHPRAIAEQIEVVKPFPDETYTPHLEGAEEELKRICYQTAHEWYGEEL
PEIVKNRLERELNSIIKHGFSVLYMISQKIVSKSLEDGYLVGSRGSVGSSVVACLSYISE
VNPLPPHYRCKKCKYSEFITDGSYESGFDLPDKKCPRCGEDLWKDGHDIPFETFLGFEGD
KAPDIDLNFDGEYQLRSHQYTEELFGKEYIYRAGSINTVKEKTAFGYVKKYAEQHNLNLR
RAEIERLAQGCVGVKRSTGQHPGGLMVVPQEREVYDFTPIQHPADDTKSGVITTHFDYKA
ISGKILKLDLLGHTGPTIQRLLHKLTGVDPTKVPLGDPKVIELFRSTKSIGVRPEDINGI
EHGTLGIPEFGTYFARGILQDAKPSCFSELVRVSGLSHGTDVWQGNVQDLINDGVCTISE
AICCRDDIMLYLIRMGLPSKAAFKIMEKVRKGKGVTEEEEALMKEHGVPDWYIECCRKIK
YMFPRAHAAAYVTAAVRIGWFKVYHPEAFYAALFSTRVNEFDIELVLKGYDAVKRKLNEI
NEMGFQASAKDKAMAATLELVMEMYARGIEFAPVDLYQSDAVKFWLDDQKRLIPPFASIS
GVGESAAQNIVQAREQGEFLSIEDLQKRARLSSTVIEVLERLGCLKGLPESNQLALF
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggaggcaagcactggttaacctgttccatgaagccgaattgccggaagaatgg
ctgaatcatgcctttcgggatggtgtgattaaagaggtgcaagtccgtctccaagacaga
acatggaatattcaccttcatttggtggagccgatgaatgcggagttatggcaggatttt
cagatgcgcgtgaaaaaacattttcagccgtgggtccgggtgaatatgtactttacctac
gaccgcttgcaacatgaaatcgttttgcaaaaatataaatattttatccaaaaatgtttg
caagaacaggtcacacccgccgccgccacttggttcggacaggctgaatggcaggtggaa
ggggaccggatcgttgtcatcttccccaacccggctgttttgaaaatggccaaacaacgg
gaaacagaccgctacatcatgaagtattacgaacgcatcaccggaaccaaactccccgtc
attttatcagcaaaagaaaccgaaccggagcaggccgccgaacaattccgcgagcagaaa
atccaagaggaaaagaccttgatgcaaaaagcgttggccgaacaaaaagagcgggccaag
aaacagaaagaaaagagcgggcatccggaggaaccggttgtaagcaaaaaattgggctac
agcatcaagggagaaccggtgaaaatcaaagacattgtcgaagaagtgcggaatgtggtc
atcaaaggcaaagtgtttaaaagcgagttgaaagagttaaaaagcggtcggaagttgtta
accttcaatttgaccgactttaccgattccatttcgtgcaaagtgtttgcccgtgacaag
gagcaagccgccgttttggccatgatccgggacggtgattggttaaaagtgcgcggaagt
gttcaatatgacacgttttcccgcgaactggtcgtgatggtgaacagcttggaagaaacc
gaacccgattcgtttgcgcgccgggatacggcggcagaaaaacgggttgagcttcatttg
cacacttccatgtcggcgatggacgggattgccagtgcggggaaaatgattcaaagagcg
gcggaatggggtcatcccgccgtggcgattaccgaccatgccgttgcgcaagcctatccg
gaagcatacaaagcggccggcgaacatggcatcaaagtgatttacggagtggaagccaat
atcgttgacgatggcattcccattgtgatgaatgaagctgagatggatttgctcgagggt
acatatgtcgtcttcgacgtggagaccaccgggttgtccgccgttcacgatgtcattatc
gaactggcagcagtcaagatgaaagacggaaaaatcatcgataaattttcctcctttgcc
aaccctcaccgcccgttgtccaaacatattgtcgagctgacgcatatcaccgacgacatg
ttgaaagacgcaccggaagtggatgatgtggtggcggattttcttgagtttatcgaagga
accgtactggtggcgcacaatgcgcgatttgacatgggatttttgcaggaagcggtgaaa
cggattggcaaggagccggtgaaaaatccggtgctggacaccctggaactggcacggatg
ttattccccgagatgcggaaccaccgcttgaacacactgtcggataagctcggtatcaaa
ctggaacagcaccaccgggcgatctatgatgcggaagccaccggccatgtgatgtggaaa
atgttgcaaatcgcggttgagaaaaagaagatcacccatttgcacatgttgaatgaaaac
cggggggaacgggatttaaaaagggttcgccctttccatgccattttgcttgtgcaaaac
caggaagggatgaaaaacctgtacaagcttatctcgatgtcccatttaaaatatttttac
cgggtgccgcgcattccccgcagcgaactcgtcaagcaccggaacggccttttggtcgga
tcgggctgtgaacgcggagaattatatgaagcggcgttaaacaagtcgccttccgaagtg
gaagaaatcgcgcgtttttatgattacttggaaatccaaccggtggagtacaacatgcat
ctggtggaaaaaggcttggtggaaaatgaagagcggttgcggcaagcgaatcaattgatt
gtcgagatcggtgagaagctgggcaaaccggtggttgccacttctaacgcccattatttg
gatgaacaggatgccatcttccgcgaaatcatcgccgcaaaccaaaccggcgcgaaaccg
caagggactttgccgaaagcgcattttcggacgacggacgagatgttgcgggaatttcaa
tatttgggcgagaaaaaatgcaaagaagtggtggtggatcatccccgggcgattgcggag
cagattgaagtggtcaagccgttcccggatgaaacgtacacgccccatttggaaggagcc
gaagaagagttaaaaaggatttgttaccaaacggctcacgaatggtacggggaagagttg
ccggaaatcgtgaagaaccggttggaacgggaattgaactccattatcaaacacggattc
agtgtgctgtacatgatttcacaaaaaatcgtcagcaaatcgctggaagacggatacttg
gtcggttcccggggatcggtcggttcttcggtcgttgcttgtttgagctatatttccgaa
gtgaatccgttgcctccccattatcgttgcaaaaagtgcaagtacagcgagtttattacc
gacggttcttatgaaagcggatttgacctgcctgacaaaaaatgtccccggtgcggggaa
gatctgtggaaagacgggcatgacatcccgtttgagacgtttcttggctttgaaggggac
aaagcgcccgatatcgatttgaactttgacggagaatatcaattgcgctcgcaccagtac
accgaggaactttttgggaaagagtacatttatcgtgcgggaagcatcaacacggtgaaa
gaaaagaccgcgtttggttatgtgaaaaagtatgcggaacaacataatttgaatttgcgg
cgtgccgaaattgagcgcctggcgcaaggttgcgtcggggtgaaaaggtccaccgggcaa
catcccggagggttgatggtggtgccgcaggaacgggaagtctatgatttcacgcccatt
cagcacccggcggatgacaccaaatccggggtgatcacgacccactttgattacaaagcc
atctccgggaagattttgaagctggatttgctcgggcatacgggacccaccatccagcgt
ctgttgcataaactgaccggtgtggatcccaccaaggttccgctcggggatcccaaggtg
attgaactgttccgcagcaccaaaagcatcggtgtccggcccgaagacattaacggaatt
gaacatggcacgttggggattccggaatttggaacctattttgcgcgtgggattttgcaa
gatgccaaacccagttgtttcagtgaattggttcgtgtgtccgggctgtcgcacgggacg
gacgtctggcagggcaatgtgcaggatttgatcaatgacggcgtttgtacgatttcggag
gccatctgttgccgtgatgatatcatgttgtatctgatccgcatgggattgccgtccaaa
gcggcgtttaagatcatggaaaaagtgagaaaaggaaaaggggttactgaagaagaggaa
gccttgatgaaagagcatggcgtgccggattggtacattgaatgctgccggaagatcaaa
tacatgttcccgcgtgcgcatgccgcggcctatgtgacggcggcggtccgcatcgggtgg
tttaaagtgtatcatccggaagctttttatgcggcattgttcagcacccgcgtcaatgaa
tttgacattgagctggttttaaaaggatatgatgcggtcaaacggaaactgaacgagatc
aacgagatgggcttccaggcatcggcgaaagacaaagccatggcggccaccttggaattg
gtgatggaaatgtatgcacggggaattgaatttgcgcccgtggacttgtaccagtcggat
gccgtcaagttttggctggatgaccaaaaacgcctcatccctccctttgcttcgatttcc
ggagtcggggagagtgcggcgcaaaacatcgtccaagcccgggagcaaggagagtttttg
tcgattgaggatttgcaaaagcgggcccgtttgtccagcacggtgatcgaagtgctggag
cggctgggttgtttgaaggggcttccggaaagcaaccagttggctttgttttaa
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integrated database retrieval system
