Thermoactinomyces vulgaris: AB849_003815
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Entry
AB849_003815 CDS
T05864
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tvu
Thermoactinomyces vulgaris
Pathway
tvu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tvu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AB849_003815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvu03021
]
AB849_003815
03400 DNA repair and recombination proteins [BR:
tvu03400
]
AB849_003815
Enzymes [BR:
tvu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AB849_003815
Transcription machinery [BR:
tvu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AB849_003815
DNA repair and recombination proteins [BR:
tvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AB849_003815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QBK14525
LinkDB
All DBs
Position
complement(734904..735848)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIEAVEISEDHRYGKFVVEPLERGYGTTLGNSLRRVLLSSLPGAAVNSIQIDG
VLHEFSTIPGVVEDTTEIILNLKQLALKIHSDEEKILEIDVEGPGDVTAGDIRADSDVEI
LNPDLHIATLSDDAHLRIRMTANRGRGYVSADKNKREDQPIGVIPVDSIYTPIERVNYQV
ENTRVGQVTNYDKLTLEVWSDGSLKPDEAVSLGAKILNEHLMLFVGLTEEAKDAEIMVEK
EEDKKEKVMEMTIEELDLSVRSYNCLKRAGINTVQELTQKTEEDMMKVRNLGRKSLEEVQ
SKLAELGLSLRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaattgaaaagccgaagatcgaagctgtggagatcagtgaagatcatcgatat
ggaaaatttgtggtggaacctcttgaacgcggatacggcactaccctgggcaactctctg
cgccgtgtcctgctctcttcattgccaggagcggccgttaattccatccagatagatggg
gtattgcatgagttttccacaattcccggagttgtggaagatacgacggaaattatttta
aacttgaagcagttggctctgaagattcattcggatgaagaaaaaatcttggagatcgat
gtggaaggccctggagatgtaaccgcaggcgacattcgcgcggacagcgatgtggaaatt
ttaaacccggatttgcacattgccacattgagtgatgatgctcatttgcgcattcggatg
acggcgaatcgtggccgcggatatgtatctgctgataaaaacaaacgtgaagatcaaccg
attggtgtgattccggtcgattcgatctacacgccgattgaacgggttaactaccaagtg
gagaacacacgggttggacaagtcaccaactatgataagctgacattggaagtatggtcc
gatggaagcttgaaaccggacgaggcggtaagccttggtgcgaaaatcctgaacgaacat
ctcatgttgtttgtcggcttgaccgaagaagcaaaagacgcggaaatcatggttgaaaaa
gaggaagacaagaaagaaaaagtcatggaaatgacaatcgaagagctcgacctttcggtt
cgctcttataactgtctgaaacgggccggcattaatacggttcaggaactgacgcaaaaa
acggaagaagacatgatgaaagtgcgtaaccttggacgcaaatctttggaagaagtacaa
agcaaattggctgagcttggtttgtctttgcgtaaagaagactaa
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