Thermoactinomyces vulgaris: AB849_004000
Help
Entry
AB849_004000 CDS
T05864
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tvu
Thermoactinomyces vulgaris
Pathway
tvu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tvu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AB849_004000 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvu03021
]
AB849_004000 (rpoC)
03400 DNA repair and recombination proteins [BR:
tvu03400
]
AB849_004000 (rpoC)
Enzymes [BR:
tvu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AB849_004000 (rpoC)
Transcription machinery [BR:
tvu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AB849_004000 (rpoC)
DNA repair and recombination proteins [BR:
tvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AB849_004000 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Pol_alpha_B_N
Motif
Other DBs
NCBI-ProteinID:
QBK12836
LinkDB
All DBs
Position
complement(756401..760015)
Genome browser
AA seq
1204 aa
AA seq
DB search
MLDVNNFEFMKIGLASPEKIRSWSRGEVKKPETINYRTLKPEKEGLFCEKIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRSLEEVIYFVSYVVVDPGSTPLEKKQLLSEKEYRTYREKYGSAFTAMMGAEAIKRLLS
EIDLDKEVEALKEELQTAQGQRRNRAIKRLEVLEAFRTSGNDPAWMVLDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPHLKMYQCGLPKE
MALELFKPFVMKELVARGLAHNIKSAKRKVERVHPEVWDVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPVLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGSYYLTLEKRNDPGEGSVFYSISEAINAYDHGYVTLHSRIAIP
AKNVGKNVFTEKQKDALLVTTVGKLIFNEIFPADFPYINEPSKENLVRTPDKYFIFEKGT
NVKEFIQNIEEPSALKKGHLGTIIAECFRRFGTTVTSEVLDKVKELGYKYSTKAGITISV
SDVTVPEEKKDILAKADEEVKKVLKQYRRGLITDDERYERVISIWSQAKDQITDVLMKNM
GKFNPIYMMANSGARGNVSQITQLAGMRGLMANPAGKIIEQPIRTNFREGLTVLEYFIST
HGARKGLADTALRTADSGYLTRRLVDVAQDVIVREDDCGTDKGISVTKLAEGNEVIEELY
DRIVGRVSFQTVRHPETGEVIVRRNELIDEDIAKEIVDAGIEEVVIRSVLTCRTRHGVCK
KCYGRNLALGTPVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQAVISEIAGTVKDIRETKDRREIEIEGAVESKVHVVPYGARLKVDVGDVVEAG
VELTEGSVDPKDLLRIKGARGVQNYILREVQKVYRLQGVEINDKHVEVMVRQMMRKVRIT
DAGTTDLLPGSIVDIHDYEDANRRELLSGGDPAVGRPVLLGITKASLETDSFLSAASFQE
TTRVLTDAAIKGKVDRLLGLKENVIIGKLIPAGTGMDRYRSMGYKLANEVGDSDKQEMEK
VTIE
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatgtaaataactttgaatttatgaaaattggtctcgcctcgcccgagaagatc
cgttcctggtcccgtggtgaggtgaaaaaacccgaaacgatcaactatcgtacgttaaag
ccggaaaaagaaggcttgttttgtgaaaaaatctttggtccgaccaaagactgggagtgt
cactgcggaaagtacaaacgggtccggtataaaggggttgtttgtgaccggtgcggtgtg
gaagtaacccgttcgaaagtgcgccgcgaacgcatggggcatatcgaattggccgcaccc
gtctcccatatttggtacttcaaaggaattcccagccggatgggtctggttctggatatg
tctccccgttcactggaagaagtgatttacttcgtttcctacgtggtcgtggatccggga
tcgaccccgctggagaaaaaacaattgttgtcggaaaaagaataccgtacttaccgcgaa
aaatacggttccgcatttacagccatgatgggggccgaagcgatcaaacggttgctttcc
gaaattgatctggataaagaagtcgaggcactgaaagaggaactgcaaaccgcacaaggg
caaagacgcaaccgtgcgatcaaacgtttggaagtgctggaagcattccgcacctccgga
aatgatccggcatggatggttttggatgttttgccggtgattcctccggaactgagaccg
atggtccaactggatggcggacggtttgccacttccgacctgaacgatttgtatcgccgg
gtgattaaccggaacaaccgcttaaaacgtttgttggatttgggtgctccggatatcatc
gtgcaaaacgagaaaagaatgttgcaggaagcggtcgacgccttgatcgataacggccgt
cgcggtcgtccggtgaccggtccgggaaaccgcccgctgaagtcgttgtcgcatatgttg
aaagggaaacaaggacgtttccgtcaaaacctgctcggaaaacgggtcgactattccggc
cgttcggtaatcgtcgtcggaccccacttgaaaatgtaccaatgcggcttgcccaaggaa
atggctttggagctctttaaaccgtttgtcatgaaagagttggtggcaagagggctggcc
cacaacatcaaaagtgctaaacggaaagtggaacgcgtccatcccgaagtttgggatgtc
ttggaggacgtgatcaaagagcatccggttctgttgaaccgtgcgccgacgttgcaccgt
ctgggaatccaagcgtttgagccggtcttggtcgaagggcgtgccatccgtttgcacccg
ctcgtatgtacggcttataacgcggactttgacggggaccaaatggcggttcacgtgccc
ctttcggctgaggcgcaagcggaagcccgtctgttgatgttggcggcacaaaacattttg
aacccgaaagacggcaaaccggtagtcacgccttcacaagacatggttctcggttcttac
tatctgacgctggaaaaaagaaacgatcccggagaaggaagtgtgttctactccatttcc
gaagcgatcaatgcatacgatcacggttatgtcactttgcattcgcggattgcgattccg
gcgaaaaacgtgggcaaaaacgtctttacggaaaagcaaaaggacgcactcttggtgaca
accgtcgggaaattgattttcaacgaaattttcccggcagatttcccgtatatcaatgaa
ccttccaaagaaaacctggtacgcactccggacaagtatttcattttcgaaaaaggaacc
aacgtgaaagaattcatccagaatatagaggaaccgtccgctttgaaaaaaggacacctc
ggaacgattattgccgagtgtttccgccgttttggaacaacggtgacctctgaggttctg
gacaaagtcaaagagttgggatacaagtattccaccaaagcgggaatcacgatttccgtt
tccgatgtcacggttccggaagaaaagaaagacattctggccaaggcagacgaagaggtt
aaaaaagtcctcaagcaataccgtcgcggtctgatcaccgacgatgaacggtatgaacgc
gtcatttcgatctggagccaggccaaagaccaaatcacggacgtcctgatgaagaatatg
ggcaaattcaaccccatttatatgatggccaactccggtgcgcgggggaacgtgtcgcaa
atcacccagctggcgggaatgcgcggtctgatggcaaacccggccggtaagatcattgaa
cagccgattcgtaccaacttccgtgaagggctgaccgtgttggagtactttatttcaaca
cacggtgcacggaaaggtttggcggataccgccctcagaacggcagactccggttatttg
acccgccgtttggtcgacgtggctcaagatgtgattgtgcgtgaagacgactgcggtacg
gataaaggaatttccgtgaccaaactggccgaaggcaatgaagtgattgaggaactgtat
gaccggatcgtgggacgggtttccttccaaacggttcgtcatccggaaacgggtgaagtg
attgtccgccggaatgaattgatcgatgaagacatcgccaaagaaattgtggatgctggc
atcgaagaagtagtcatccgttcggtgctgacatgccggacccgacacggggtgtgcaaa
aaatgttacggacgcaacctggccttgggtacgccggtggaagtcggtgaagccgtcgga
atcattgccgcccaatcgatcggtgaacccggaacccagctgacgatgcggacgttccat
acaggcggggtggccggagacgacatcacccaaggtttgccacggattcaagagctgttt
gaggcccggaatccaaaaggtcaggcggtcatcagtgaaattgccggtacggtcaaagac
atccgcgaaaccaaggatcgccgtgaaatcgaaattgaaggagcggtggaatccaaagtt
catgtcgttccgtacggcgcacggctgaaagtggacgtgggtgatgttgtggaagccggt
gtggagctgaccgaaggttcggtggacccgaaagatctgctccgcatcaaaggcgcccgc
ggggttcaaaattatatcttgcgcgaggtacaaaaagtgtaccgcttgcaaggggttgaa
attaacgataaacacgttgaggtcatggttcgccaaatgatgcgcaaagtccggatcacc
gatgctggaacgacggacttgttgccggggtccatcgtggatattcacgattacgaagat
gccaaccggagagaactgttgtcgggcggggatccggcagtgggccgtccggttctgctc
ggaatcaccaaggcttcactggagaccgattccttcctgtcggcagcatcgttccaagaa
acaacccgcgtcttgaccgatgccgccatcaaaggaaaagtggatcgtctgttgggattg
aaagaaaacgtgattatcgggaaattgatcccggccggtaccggtatggatcgttaccgt
tccatgggatacaagttggcgaatgaagtcggggacagcgacaaacaggagatggaaaag
gtaacgattgaatag
DBGET
integrated database retrieval system
