KEGG   Thermoactinomyces vulgaris: AB849_007980
Entry
AB849_007980      CDS       T05864                                 
Symbol
cas6
Name
(GenBank) CRISPR-associated endoribonuclease Cas6
  KO
K19091  CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
Organism
tvu  Thermoactinomyces vulgaris
Brite
KEGG Orthology (KO) [BR:tvu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tvu02048]
    AB849_007980 (cas6)
Prokaryotic defense system [BR:tvu02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-A factors
    AB849_007980 (cas6)
   Subtype I-D factors
    AB849_007980 (cas6)
SSDB
Motif
Pfam: Cas_Cas6_C Cas6_I-A
Other DBs
NCBI-ProteinID: QBK13536
LinkDB
Position
complement(1547073..1547819)
AA seq 248 aa
MRIRFVFEIPAETSLPYHYPYALMSYFYHAVRMADPDLAEWLHQEGIPYEGRKYKPFVFS
PLAFDHCRKSPGQMRVQGKATWKVDSIHPPLLQALCQGIQALNHLQLFSHRFPLHSIHFE
ERPRFESVMNYRCLGPVVFPVRKEGKLVFCHPLESDFYDQIRTSLHGWAKLKWGVDDSNP
APIRIRLLNPGHFRLEQAATLIDIKGKKTKGYQMPLQIHASPRIQEVAMEAGIGSYTNQG
FGMLEPLS
NT seq 747 nt   +upstreamnt  +downstreamnt
atgcgaattcgatttgtgtttgagatcccggcggaaacatcacttccttaccattatcca
tatgccctgatgagttacttttaccacgccgtcaggatggcggatccggatctggctgag
tggttgcatcaggaaggcatcccctatgaaggacgaaaatacaagccgttcgttttttcc
cccctcgcttttgaccattgccggaaatcccccggacaaatgcgggtacagggaaaagcg
acatggaaagtggattcgattcatcctcccttgttgcaagcactctgccaaggcatccaa
gcactcaaccatttacaactgttttcacaccgttttcctttgcactcgattcattttgag
gaacggccccgtttcgaatctgtcatgaattatcgttgtttggggccagtggtgtttcct
gtccgcaaagaagggaagttggtgttttgccatccgctggaaagcgatttttatgaccaa
attcgaacatccctccatggttgggccaaattgaaatggggagtggatgactccaacccg
gctcccattcgcatccgtttgctgaatcccggacactttcgccttgaacaagctgccact
ttgatcgacatcaaaggaaaaaagaccaaaggataccaaatgcctctgcaaatccatgca
tccccccgtattcaggaagtggcaatggaagcgggaatcgggagttataccaatcaaggc
tttggcatgttggaacccctgtcctga

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